Evidence map›Paper›PMID 26484131›Full record

ArticleGenomics data2014

Genome-wide gene expression profiling of acute metal exposures in male zebrafish.

Christine E Baer, Danielle L Ippolito, Naissan Hussainzada, John A Lewis, David A Jackson, Jonathan D Stallings

Open access · goldAbstract read
In one paragraph

Article in Genomics data, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Population genetic diversity in zebrafish lines.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Christine E BaerExcet, Inc., Fort Detrick, Frederick, MD 21702-5010, USA.
Danielle L IppolitoEnvironmental Health Program, US Army Center for Environmental Health Research, Fort Detrick, Frederick, MD 21702-5010, USA.
Naissan HussainzadaORISE Postdoctoral Fellow, Fort Detrick, Frederick, MD 21702-5010, USA.
John A LewisEnvironmental Health Program, US Army Center for Environmental Health Research, Fort Detrick, Frederick, MD 21702-5010, USA.
David A JacksonPulmonary Health Program, US Army Center for Environmental Health Research, Fort Detrick, Frederick, MD 21702-5010, USA.
Jonathan D StallingsEnvironmental Health Program, US Army Center for Environmental Health Research, Fort Detrick, Frederick, MD 21702-5010, USA.
Center for Environmental Health · USExcet (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To capture global responses to metal poisoning and mechanistic insights into metal toxicity, gene expression changes were evaluated in whole adult male zebrafish following acute 24 h high dose exposure to three metals with known human health risks. Male adult zebrafish were exposed to nickel chloride, cobalt chloride or sodium dichromate at concentrations corresponding to their respective 96 h LC20, LC40 and LC60 (i.e. 96 h concentrations at which 20%, 40% and 60% lethality is expected, respectively). Histopathology was performed on a subset of metal-exposed zebrafish to phenotypically anchor transcriptional changes associated with each metal exposure. Here we describe in detail the contents and quality controls for the gene expression and other data associated with the study published by Hussainzada and colleagues in BMC Pharmacology and Toxicology (Hussainzada et al., 2014) with the data uploaded to Gene Expression Omnibus (accession number GSE50648).

Indexed as

ChromiumCobaltNickelToxicogenomicsWhole organismZebrafish

Identifiers

PMID26484131
PMCPMC4535742
OpenAlexW2092653126

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.