ArticleFrontiers in genetics2015
Rice transcriptome analysis to identify possible herbicide quinclorac detoxification genes.
Article in Frontiers in genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed, 36 citations in OpenAlex.
- Deciphering Pesticide Stress Responses in Rice Through Integrated Multi-Omic Assessment.Toxics · 2026Review
- A mutation of GRAS SCL14 gene confers moderate sensitivity to the herbicide bentazon in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Mechanism of Herbicidal Action and Rice Selectivity of Iptriazopyrid: A Novel Azole Carboxamide-Based Inhibitor of 4-Hydroxyphenylpyruvate Dioxygenase.Journal of agricultural and food chemistry · 2025Article
- Transcriptionally linked simultaneous overexpression of P450 genes for broad-spectrum herbicide resistance.Plant physiology · 2023Article
- ABC transporters linked to multiple herbicide resistance in blackgrass (Frontiers in plant science · 2023Article
- Cytochrome P450 CYP709C56 metabolizing mesosulfuron-methyl confers herbicide resistance in Alopecurus aequalis.Cellular and molecular life sciences : CMLS · 2022Article
- Understanding plant-microbe interaction of rice and soybean with two contrasting diazotrophic bacteria through comparative transcriptome analysis.Frontiers in plant science · 2022Article
- Barnyard Millet for Food and Nutritional Security: Current Status and Future Research Direction.Frontiers in genetics · 2020Review
- Cost-effective detection of genome-wide signatures for 2,4-D herbicide resistance adaptation in red clover.Scientific reports · 2019Article
- Transcriptome analysis of Oryza sativa in responses to different concentrations of thiocyanate.Environmental science and pollution research international · 2019Article
- Expression Profile of Defense Genes in Rice Lines Pyramided with Resistance Genes Against Bacterial Blight, Fungal Blast and Insect Gall Midge.Rice (New York, N.Y.) · 2018Article
- Unraveling the Transcriptional Basis of Temperature-Dependent Pinoxaden Resistance inFrontiers in plant science · 2017Article
Corrections and comments
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Authors and funding
9 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Quinclorac is a highly selective auxin-type herbicide and is widely used in the effective control of barnyard grass in paddy rice fields, improving the world's rice yield. The herbicide mode of action of quinclorac has been proposed, and hormone interactions affecting quinclorac signaling has been identified. Because of widespread use, quinclorac may be transported outside rice fields with the drainage waters, leading to soil and water pollution and other environmental health problems. In this study, we used 57K Affymetrix rice whole-genome array to identify quinclorac signaling response genes to study the molecular mechanisms of action and detoxification of quinclorac in rice plants. Overall, 637 probe sets were identified with differential expression levels under either 6 or 24 h of quinclorac treatment. Auxin-related genes such as GH3 and OsIAAs responded to quinclorac treatment. Gene Ontology analysis showed that genes of detoxification-related family genes were significantly enriched, including cytochrome P450, GST, UGT, and ABC and drug transporter genes. Moreover, real-time RT-PCR analysis showed that top candidate genes of P450 families such as CYP81, CYP709C, and CYP72A were universally induced by different herbicides. Some Arabidopsis genes of the same P450 family were up-regulated under quinclorac treatment. We conducted rice whole-genome GeneChip analysis and the first global identification of quinclorac response genes. This work may provide potential markers for detoxification of quinclorac and biomonitors of environmental chemical pollution.
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