ArticleFrontiers in plant science2015
A genome-wide analysis of the auxin/indole-3-acetic acid gene family in hexaploid bread wheat (Triticum aestivum L.).
Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
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25 citing papers in PubMed.
- Genome-Wide Identification and In Silico Expression Analysis ofPlants (Basel, Switzerland) · 2025Article
- Biological Characteristics of a Novel Bibenzyl Synthase (Molecules (Basel, Switzerland) · 2024Article
- Genome-Wide Analysis of Aux/IAA Gene Family inPlants (Basel, Switzerland) · 2024Article
- Genome-Wide Identification of theInternational journal of molecular sciences · 2024Article
- Genome-wide identification, expression analysis, and transcriptome analysis of the IAA gene family in Zoysia japonica.Molecular biology reports · 2023Article
- Characterization of the Key Bibenzyl Synthase inInternational journal of molecular sciences · 2022Article
- Genome-wide identification of CCT genes in wheat (Triticum aestivum L.) and their expression analysis during vernalization.PloS one · 2022Article
- Genome-wide identification and expression analysis of the NCED family in cotton (Gossypium hirsutum L.).PloS one · 2021Article
- Genome-Wide Identification, Evolution, and Expression Analysis of LBD Transcription Factor Family in Bread Wheat (Frontiers in plant science · 2021Article
- Genome-wide characterization and expression analysis of geranylgeranyl diphosphate synthase genes in cotton (Gossypium spp.) in plant development and abiotic stresses.BMC genomics · 2020Article
- Genome-wide characterization and expression analyses of the auxin/indole-3-acetic acid (Aux/IAA) gene family in barley (Hordeum vulgare L.).Scientific reports · 2020Article
- Article
- The roles of Aux/IAA gene family in development of Dendrocalamus sinicus (Poaceae: Bambusoideae) inferred by comprehensive analysis and expression profiling.Molecular biology reports · 2019Article
- Genome-wide characterization and phylogenetic analysis of GSK gene family in three species of cotton: evidence for a role of some GSKs in fiber development and responses to stress.BMC plant biology · 2018Article
- Genome-Wide Identification and Transcriptional Regulation of Aquaporin Genes in Bread Wheat (Genes · 2018Article
- Article
- Aux/IAA Gene Family in Plants: Molecular Structure, Regulation, and Function.International journal of molecular sciences · 2018Review
- Characterization and Expression Patterns of Auxin Response Factors in Wheat.Frontiers in plant science · 2018Article
- Genome-wide analysis of the auxin/indoleacetic acid (Aux/IAA) gene family in allotetraploid rapeseed (Brassica napus L.).BMC plant biology · 2017Article
- Evolution of the Aux/IAA Gene Family in Hexaploid Wheat.Journal of molecular evolution · 2017Article
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12 authors.
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Abstract
The Auxin/indole-3-acetic acid (Aux/IAA) gene family plays key roles in the primary auxin-response process and controls a number of important traits in plants. However, the characteristics of the Aux/IAA gene family in hexaploid bread wheat (Triticum aestivum L.) have long been unknown. In this study, a comprehensive identification of the Aux/IAA gene family was performed using the latest draft genome sequence of the bread wheat "Chinese Spring." Thirty-four Aux/IAA genes were identified, 30 of which have duplicated genes on the A, B or D sub-genome, with a total of 84 Aux/IAA sequences. These predicted Aux/IAA genes were non-randomly distributed in all the wheat chromosomes except for chromosome 2D. The information of wheat Aux/IAA proteins is also described. Based on an analysis of phylogeny, expression and adaptive evolution, we prove that the Aux/IAA family in wheat has been replicated twice in the two allopolyploidization events of bread wheat, when the tandem duplication also occurred. The duplicated genes have undergone an evolutionary process of purifying selection, resulting in the high conservation of copy genes among sub-genomes and functional redundancy among several members of the TaIAA family. However, functional divergence probably existed in most TaIAA members due to the diversity of the functional domain and expression pattern. Our research provides useful information for further research into the function of Aux/IAA genes in wheat.
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