Evidence map›Paper›PMID 26483491›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Genetic structure in village dogs reveals a Central Asian domestication origin.

Laura M Shannon, Ryan H Boyko, Marta Castelhano, Elizabeth Corey, Jessica J Hayward, Corin McLean, Michelle E White, Mounir Abi Said, Baddley A Anita, Nono Ikombe Bondjengo and 17 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed
21.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 217 citations in OpenAlex.

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  9. The impacts of European arrival on Australian dingoes.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  10. Mating system of free-ranging domestic dogs and its consequences for dog evolution.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  20. Review

42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

27 authors at 15 institutions in 10 countries.

Laura M ShannonDepartment of Biomedical Sciences, Cornell University, Ithaca, NY 14853;
Ryan H BoykoDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, Yale University, New Haven, CT 06510;
Marta CastelhanoDepartment of Clinical Sciences, Cornell University, Ithaca, NY 14853;
Elizabeth CoreyDepartment of Clinical Sciences, Cornell University, Ithaca, NY 14853;
Jessica J HaywardDepartment of Biomedical Sciences, Cornell University, Ithaca, NY 14853;
Corin McLeanBiogen Idec, Cambridge, MA 02142;
Michelle E WhiteDepartment of Biomedical Sciences, Cornell University, Ithaca, NY 14853;
Mounir Abi SaidBiology Department, American University of Beirut, Beirut, Lebanon;
Baddley A AnitaHoniara Veterinary Clinic and Surgery, Honiara, Solomon Islands;
Nono Ikombe BondjengoDépartement de l'environnement, Faculté des Sciences, Université de Mbandaka, Mbandaka, Democratic Republic of Congo;
Jorge CaleroAcadémico de Arqueologia, Universidad Nacional de San Antonio Abad del Cusco, Cusco, Peru;
Ana GalovDepartment of Animal Physiology, University of Zagreb, Zagreb 10000, Croatia;
Marius HedimbiMicrobiology, University of Namibia, Windhoek, Namibia;
Bulu ImamSanskriti Centre, Hazaribagh, Jharkhand, India 825 301;
Rajashree KhalapThe INDog Project, Maharashtra, India;
Douglas LallyThe Mongolian Bankhar Project, Ulaanbaatar, Mongolia;
Andrew MastaSchool of Medicine and Health Sciences, University of Papua New Guinea, Boroko, Port Moresby, National Capital District, 111, Papua New Guinea;
Kyle C OliveiraDepartment of Biomedical Sciences, Cornell University, Ithaca, NY 14853;
Lucía PérezInstituto de Biología, Universidad Nacional Autónoma de México, Mexico City, Federal District, Mexico;
Julia RandallUniversity of Massachusetts Medical School, Worcester, MA 01655;
Nguyen Minh TamVietnam National Museum of Nature, Vietnam Academy of Science and Technology, Hanoi, Vietnam;
Francisco J Trujillo-CornejoInstituto de Biología, Universidad Nacional Autónoma de México, Mexico City, Federal District, Mexico;
Carlos ValerianoAcadémico de Arqueologia, Universidad Nacional de San Antonio Abad del Cusco, Cusco, Peru;
Nathan B SutterDepartment of Biology, La Sierra University, Riverside, CA 92505;
Rory J TodhunterDepartment of Clinical Sciences, Cornell University, Ithaca, NY 14853;
Carlos D BustamanteDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305.
Adam R BoykoDepartment of Biomedical Sciences, Cornell University, Ithaca, NY 14853; boyko@cornell.edu.
Cornell University · USNational University of Saint Anthony the Abbot in Cuzco · PEUniversidad Nacional Autónoma de México · MXAmerican University of Beirut · LBBiogen (United States) · USLa Sierra University · USStanford University · USUniversity of Massachusetts Chan Medical School · USUniversity of Mbandaka · CDUniversity of Namibia · NAUniversity of Papua New Guinea · PGUniversity of Zagreb · HRVietnam Academy of Science and Technology · VNVinoba Bhave University · INYale University · US

Funding

Graduate Training Program in Comparative MedicineT32OD011000 · OD · CORNELL UNIVERSITY · PI Amanda Marjorie DE MESTRE · 2012 to 2026
$5.7M
NIH HHS T32 OD011000
6 · The paper itself

Abstract

Dogs were the first domesticated species, originating at least 15,000 y ago from Eurasian gray wolves. Dogs today consist primarily of two specialized groups--a diverse set of nearly 400 pure breeds and a far more populous group of free-ranging animals adapted to a human commensal lifestyle (village dogs). Village dogs are more genetically diverse and geographically widespread than purebred dogs making them vital for unraveling dog population history. Using a semicustom 185,805-marker genotyping array, we conducted a large-scale survey of autosomal, mitochondrial, and Y chromosome diversity in 4,676 purebred dogs from 161 breeds and 549 village dogs from 38 countries. Geographic structure shows both isolation and gene flow have shaped genetic diversity in village dog populations. Some populations (notably those in the Neotropics and the South Pacific) are almost completely derived from European stock, whereas others are clearly admixed between indigenous and European dogs. Importantly, many populations--including those of Vietnam, India, and Egypt-show minimal evidence of European admixture. These populations exhibit a clear gradient of short--range linkage disequilibrium consistent with a Central Asian domestication origin.

Indexed as

Genetics, PopulationAnimalsAnimals, DomesticAsiaDogsadmixturedomesticationhaplotype diversityintrogressionlinkage disequilibrium

Identifiers

PMID26483491
PMCPMC4640804
OpenAlexW1938007556

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.