Evidence map›Paper›PMID 26483471›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Subdiffusive motion of bacteriophage in mucosal surfaces increases the frequency of bacterial encounters.

Jeremy J Barr, Rita Auro, Nicholas Sam-Soon, Sam Kassegne, Gregory Peters, Natasha Bonilla, Mark Hatay, Sarah Mourtada, Barbara Bailey, Merry Youle and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 116 papers.

0numbers the graph read from it
0cells of the map it votes in
116citing papers in PubMed
10.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

116 citing papers in PubMed, 221 citations in OpenAlex.

  1. Article
  2. Characterization ofMicrobiology spectrum · 2026
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  19. Journal of virology · 2025
    Article
  20. Microscopic phage adsorption assay: High-throughput quantification of virus particle attachment to host bacterial cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article

56 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Jeremy J BarrDepartment of Biology, San Diego State University, San Diego, CA 92182; jeremybarr85@gmail.com.
Rita AuroDepartment of Biology, San Diego State University, San Diego, CA 92182;
Nicholas Sam-SoonDepartment of Mechanical Engineering, San Diego State University, San Diego, CA 92182;
Sam KassegneDepartment of Mechanical Engineering, San Diego State University, San Diego, CA 92182;
Gregory PetersDepartment of Biology, San Diego State University, San Diego, CA 92182;
Natasha BonillaDepartment of Biology, San Diego State University, San Diego, CA 92182;
Mark HatayDepartment of Biology, San Diego State University, San Diego, CA 92182;
Sarah MourtadaDepartment of Mathematics, San Diego State University, San Diego, CA 92182;
Barbara BaileyDepartment of Mathematics, San Diego State University, San Diego, CA 92182;
Merry YouleRainbow Rock, Ocean View, HI 96737;
Ben FeltsDepartment of Mathematics, San Diego State University, San Diego, CA 92182;
Arlette BaljonDepartment of Physics, San Diego State University, San Diego, CA 92182.
Jim NultonDepartment of Mathematics, San Diego State University, San Diego, CA 92182;
Peter SalamonDepartment of Mathematics, San Diego State University, San Diego, CA 92182;
Forest RohwerDepartment of Biology, San Diego State University, San Diego, CA 92182;
San Diego State University · USNational Cancer Institute · US

Funding

U of Calif, San Diego Neuroscience Microscopy ImagingP30NS047101 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GLEESON, JOSEPH G, ZHENG, BINHAI · 2003 to 2022
$9.0M
Ecology of Cystic Fibrosis: Administrative SupplementR01GM095384 · NIGMS · SAN DIEGO STATE UNIVERSITY · PI ROHWER, FOREST L · 2011 to 2014
$1.9M
Hydra as an Antiviral Innate Immunity Model SystemR21AI094534 · NIAID · SAN DIEGO STATE UNIVERSITY · PI ROHWER, FOREST L · 2011 to 2012
$411k
NIAID NIH HHS R21 AI094534NIAID NIH HHS R21AI094534NIGMS NIH HHS R01 GM095384NIGMS NIH HHS R01GM095384-01NINDS NIH HHS NS047101NINDS NIH HHS P30 NS047101
6 · The paper itself

Abstract

Bacteriophages (phages) defend mucosal surfaces against bacterial infections. However, their complex interactions with their bacterial hosts and with the mucus-covered epithelium remain mostly unexplored. Our previous work demonstrated that T4 phage with Hoc proteins exposed on their capsid adhered to mucin glycoproteins and protected mucus-producing tissue culture cells in vitro. On this basis, we proposed our bacteriophage adherence to mucus (BAM) model of immunity. Here, to test this model, we developed a microfluidic device (chip) that emulates a mucosal surface experiencing constant fluid flow and mucin secretion dynamics. Using mucus-producing human cells and Escherichia coli in the chip, we observed similar accumulation and persistence of mucus-adherent T4 phage and nonadherent T4∆hoc phage in the mucus. Nevertheless, T4 phage reduced bacterial colonization of the epithelium >4,000-fold compared with T4∆hoc phage. This suggests that phage adherence to mucus increases encounters with bacterial hosts by some other mechanism. Phages are traditionally thought to be completely dependent on normal diffusion, driven by random Brownian motion, for host contact. We demonstrated that T4 phage particles displayed subdiffusive motion in mucus, whereas T4∆hoc particles displayed normal diffusion. Experiments and modeling indicate that subdiffusive motion increases phage-host encounters when bacterial concentration is low. By concentrating phages in an optimal mucus zone, subdiffusion increases their host encounters and antimicrobial action. Our revised BAM model proposes that the fundamental mechanism of mucosal immunity is subdiffusion resulting from adherence to mucus. These findings suggest intriguing possibilities for engineering phages to manipulate and personalize the mucosal microbiome.

Indexed as

MotionBacteriophage T4Escherichia coliMucusBAMmucussearch strategysubdiffusionvirus

Identifiers

PMID26483471
PMCPMC4640763
OpenAlexW2224598474

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.