Evidence map›Paper›PMID 26483072›Full record

ArticleBMC genomics2015

Additive transcriptomic variation associated with reproductive traits suggest local adaptation in a recently settled population of the Pacific oyster, Crassostrea gigas.

Rossana Sussarellu, Arnaud Huvet, Sylvie Lapègue, Virgile Quillen, Christophe Lelong, Florence Cornette, Lasse Fast Jensen, Nicolas Bierne, Pierre Boudry

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  5. Article
  6. Oyster reproduction is affected by exposure to polystyrene microplastics.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Rossana SussarelluIfremer, Laboratoire des Sciences de l'Environnement Marin UMR 6539 (UBO/CNRS/IRD/Ifremer), Plouzané, France. Rossana.sussarellu@ifremer.fr.
Arnaud HuvetIfremer, Laboratoire des Sciences de l'Environnement Marin UMR 6539 (UBO/CNRS/IRD/Ifremer), Plouzané, France. Arnaud.huvet@ifremer.fr.
Sylvie LapègueIfremer, SG2M-LGPMM, Laboratoire de Génétique et Pathologie des Mollusques Marins, 17390, La Tremblade, France. Sylvie.Lapegue@ifremer.fr.
Virgile QuillenIfremer, Laboratoire des Sciences de l'Environnement Marin UMR 6539 (UBO/CNRS/IRD/Ifremer), Plouzané, France. Virgile.quillien@ifremer.fr.
Christophe LelongUNICAEN, UMR BOREA MNHN, UPMC, UNICAEN, CNRS-7208, IRD207, F-14032, Caen, France. Christophe.lelong@unicaen.fr.
Florence CornetteIfremer, SG2M-LGPMM, Laboratoire de Génétique et Pathologie des Mollusques Marins, 17390, La Tremblade, France. Florence.cornette@ifremer.fr.
Lasse Fast JensenFisheries and Maritime Museum, DK-6710, Esbjerg V, Denmark. Lfj@fimus.dk.
Nicolas BierneUniversité Montpellier 2, Montpellier, France. nicolas.bierne@univ-montp2.fr.
Pierre BoudryIfremer, Laboratoire des Sciences de l'Environnement Marin UMR 6539 (UBO/CNRS/IRD/Ifremer), Plouzané, France. Pierre.boudry@ifremer.fr.
Centre National de la Recherche Scientifique · FRIfremer · FRNational Maritime Museum · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOriginating from Northeast Asia, the Pacific oyster Crassostrea gigas has been introduced into a large number of countries for aquaculture purpose. Following introduction, the Pacific oyster has turned into an invasive species in an increasing number of coastal areas, notably recently in Northern Europe.

methodsTo explore potential adaptation of reproductive traits in populations with different histories, we set up a common garden experiment based on the comparison of progenies from two populations of Pacific oyster sampled in France and Denmark and their hybrids. Sex ratio, condition index and microarray gene expression in gonads, were analyzed in each progeny (n = 60).

resultsA female-biased sex-ratio and a higher condition index were observed in the Danish progeny, possibly reflecting an evolutionary reproductive strategy to increase the potential success of natural recruitment in recently settled population. Using multifarious statistical approaches and accounting for sex differences we identified several transcripts differentially expressed between the Danish and French progenies, for which additive genetic basis is suspected (showing intermediate expression levels in hybrids, and therefore additivity). Candidate transcripts included mRNA coding for sperm quality and insulin metabolism, known to be implicated in coordinated control and success of reproduction.

conclusionsObserved differences suggest that adaptation of invasive populations might have occurred during expansion acting on reproductive traits, and in particular on a female-biased sex-ratio, gamete quality and fertility.

Indexed as

Adaptation, PhysiologicalAnimalsFemaleGene Expression ProfilingGonadsIntroduced SpeciesMaleOstreidaePhenotypeReproduction

Identifiers

PMID26483072
PMCPMC4613751
OpenAlexW2164645763

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.