Evidence map›Paper›PMID 26482532›Full record

ArticleScientific reports2015

The non-octarepeat copper binding site of the prion protein is a key regulator of prion conversion.

Gabriele Giachin, Phuong Thao Mai, Thanh Hoa Tran, Giulia Salzano, Federico Benetti, Valentina Migliorati, Alessandro Arcovito, Stefano Della Longa, Giordano Mancini, Paola D'Angelo and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
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  8. Article
  9. EPR of copper centers in the prion protein.Methods in enzymology · 2022
    Article
  10. Neurometals in the Pathogenesis of Prion Diseases.International journal of molecular sciences · 2021
    Review
  11. PrPFrontiers in molecular neuroscience · 2021
    Review
  12. Using NMR spectroscopy to investigate the role played by copper in prion diseases.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2020
    Review
  13. N-Terminal Regions of Prion Protein: Functions and Roles in Prion Diseases.International journal of molecular sciences · 2020
    Review
  14. Article
  15. Article
  16. Review
  17. Review
  18. Copper signalling: causes and consequences.Cell communication and signaling : CCS · 2018
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Gabriele GiachinDepartment of Neuroscience, Scuola Internazionale Superiore di Studi Avanzati (SISSA), Trieste, Italy.
Phuong Thao MaiDepartment of Neuroscience, Scuola Internazionale Superiore di Studi Avanzati (SISSA), Trieste, Italy.
Thanh Hoa TranDepartment of Neuroscience, Scuola Internazionale Superiore di Studi Avanzati (SISSA), Trieste, Italy.
Giulia SalzanoDepartment of Neuroscience, Scuola Internazionale Superiore di Studi Avanzati (SISSA), Trieste, Italy.
Federico BenettiDepartment of Neuroscience, Scuola Internazionale Superiore di Studi Avanzati (SISSA), Trieste, Italy.
Valentina MiglioratiDepartment of Chemistry, Sapienza University of Rome, Rome, Italy.
Alessandro ArcovitoIstituto di Biochimica e Biochimica Clinica, Università Cattolica del Sacro Cuore, Rome, Italy.
Stefano Della LongaDepartment of Medicine, Public Health, Life and Environmental Science, University of L'Aquila, Coppito Aquila, Italy.
Giordano ManciniScuola Normale Superiore, Pisa, Italy.
Paola D'AngeloDepartment of Chemistry, Sapienza University of Rome, Rome, Italy.
Giuseppe LegnameDepartment of Neuroscience, Scuola Internazionale Superiore di Studi Avanzati (SISSA), Trieste, Italy.
Scuola Internazionale Superiore di Studi Avanzati · ITSapienza University of Rome · ITElettra-Sincrotrone Trieste S.C.p.A. · ITIstituto Nazionale di Fisica Nucleare, Sezione di Pisa · ITUniversità Cattolica del Sacro Cuore · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The conversion of the prion protein (PrP(C)) into prions plays a key role in transmissible spongiform encephalopathies. Despite the importance for pathogenesis, the mechanism of prion formation has escaped detailed characterization due to the insoluble nature of prions. PrP(C) interacts with copper through octarepeat and non-octarepeat binding sites. Copper coordination to the non-octarepeat region has garnered interest due to the possibility that this interaction may impact prion conversion. We used X-ray absorption spectroscopy to study copper coordination at pH 5.5 and 7.0 in human PrP(C) constructs, either wild-type (WT) or carrying pathological mutations. We show that mutations and pH cause modifications of copper coordination in the non-octarepeat region. In the WT at pH 5.5, copper is anchored to His96 and His111, while at pH 7 it is coordinated by His111. Pathological point mutations alter the copper coordination at acidic conditions where the metal is anchored to His111. By using in vitro approaches, cell-based and computational techniques, we propose a model whereby PrP(C) coordinating copper with one His in the non-octarepeat region converts to prions at acidic condition. Thus, the non-octarepeat region may act as the long-sought-after prion switch, critical for disease onset and propagation.

Indexed as

Binding SitesAmino Acid MotifsAmino Acid SequenceAmino Acid SubstitutionCell Line, TumorConserved SequenceCopperHumansHydrophobic and Hydrophilic InteractionsModels, MolecularMolecular Sequence DataMutationPrionsProtein BindingProtein ConformationProtein Structure, TertiaryCopperPrions

Identifiers

PMID26482532
PMCPMC4651146
OpenAlexW1760677314

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.