Evidence map›Paper›PMID 26482241›Full record

ArticleMolecular biotechnology2015

Molecular Cloning and Characterization of a (Lys)6-Tagged Sulfide-Reactive Hemoglobin I from Lucina pectinata.

Ramonita Díaz-Ayala, Andrés Moya-Rodríguez, Ruth Pietri, Carmen L Cadilla, Juan López-Garriga

Abstract read
In one paragraph

Article in Molecular biotechnology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Chemical Biology of HChemical reviews · 2018
    Review
  3. Engineered (Lys)ACS omega · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ramonita Díaz-Ayala
Andrés Moya-Rodríguez
Ruth Pietri
Carmen L Cadilla
Juan López-Garriga
University of Puerto Rico-Mayaguez · PRUniversity of Puerto Rico, Medical Sciences Campus · PR

Funding

SCIENCE AND TECHNOLOGY COMPETENCY & EDUCATION CORE (STCE)P20GM103475 · NIGMS · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI Humberto Guillermo Ortiz-Zuazaga · 2012 to 2026
$52.9M
SUPPLEMENT FOR RENOVATION OF ANIMAL FACILITIES AT INSTITUTE OF NEUROBIOLOGYG12RR003051 · NCRR · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI FERNANDEZ-REPOLLET, EMMA · 1986 to 2011
$28.1M
TRANSLATIONAL PROTEOMICS CENTERG12MD007600 · NIMHD · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI FERNANDEZ-REPOLLET, EMMA · 2012 to 2016
$11.0M
Transitional MARC-U-STAR-UPRM toward a Diversity Enhancement restructuringT34GM008419 · NIGMS · UNIVERSITY OF PUERTO RICO MAYAGUEZ · PI ORTIZ-BERMUDEZ, PATRICIA, RIOS-VELAZQUEZ, CARLOS · 1991 to 2021
$8.8M
RISE Enhancing Biomedical Sciences and Biomedical Engineering in Science and TechR25GM088023 · NIGMS · UNIVERSITY OF PUERTO RICO MAYAGUEZ · PI LOPEZ-GARRIGA, JUAN · 2010 to 2013
$5.0M
NCRR NIH HHS G12 RR003051NCRR NIH HHS G12-RR003051NIGMS NIH HHS 5T34GM008419-23NIGMS NIH HHS P20 GM103475NIGMS NIH HHS P20GM103475NIGMS NIH HHS R25 GM088023NIGMS NIH HHS R25GM088023NIGMS NIH HHS T34 GM008419NIMHD NIH HHS G12 MD007600NIMHD NIH HHS G12-MD007600
6 · The paper itself

Abstract

A poly-Lys tag was fused to the Lucina pectinata hemoglobin I (HbI) coding sequence and purified using an efficient and fast process. HbI is a hemeprotein that binds hydrogen sulfide (H2S) with high affinity and it has been used to understand physiologically relevant reactions of this signaling molecule. The (Lys)6-tagged rHbI construct was expressed in E. coli and purified by immobilization on a cation exchange matrix, followed by size-exclusion chromatography. The identity, structure, and function of the (Lys)6-tagged rHbI were assessed by mass spectrometry, small and wide X-ray scattering, optical spectroscopy, and kinetic analysis. The scattering and spectroscopic results showed that the (Lys)6-tagged rHbI is structurally and functionally analogous to the native protein as well as to the (His)6-tagged rHbI. Kinetics studies with H2S indicated that the association (k on) and dissociation (k off) rate constants were 1.4 × 10(5)/M/s and 0.1 × 10(-3)/s, respectively. This results confirmed that the (Lys)6-tagged rHbI binds H2S with the same high affinity as its homologue.

Indexed as

Cloning, MolecularAmino Acid SequenceAnimalsBivalviaEscherichia coliGene Expression RegulationHemeproteinsHemoglobinsHydrogen SulfideMembrane Fusion ProteinsMolecular Sequence DataProtein ConformationScattering, RadiationSulfidesHemeproteinshemoglobin I, non-mammalianHemoglobinsHydrogen SulfideMembrane Fusion ProteinsSulfides

Identifiers

PMID26482241
PMCPMC4937220
OpenAlexW2466258335

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.