Evidence map›Paper›PMID 26477663›Full record

ArticleScientific reports2015

Glycolipid dynamics in generation and differentiation of induced pluripotent stem cells.

Takuma Ojima, Eri Shibata, Shiho Saito, Masashi Toyoda, Hideki Nakajima, Mayu Yamazaki-Inoue, Yoshitaka Miyagawa, Nobutaka Kiyokawa, Jun-Ichiro Fujimoto, Toshinori Sato and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 23 citations in OpenAlex.

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  14. Characterization of H type 1 and type 1The Journal of biological chemistry · 2017
    Article
  15. Glycosylation and stem cells: Regulatory roles and application of iPSCs in the study of glycosylation-related disorders.BioEssays : news and reviews in molecular, cellular and developmental biology · 2016
    Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Takuma OjimaNational Research Institute for Child Health and Development, Tokyo, 157-8535, Japan.
Eri ShibataNational Research Institute for Child Health and Development, Tokyo, 157-8535, Japan.
Shiho SaitoNational Research Institute for Child Health and Development, Tokyo, 157-8535, Japan.
Masashi ToyodaNational Research Institute for Child Health and Development, Tokyo, 157-8535, Japan.
Hideki NakajimaNational Research Institute for Child Health and Development, Tokyo, 157-8535, Japan.
Mayu Yamazaki-InoueNational Research Institute for Child Health and Development, Tokyo, 157-8535, Japan.
Yoshitaka MiyagawaNational Research Institute for Child Health and Development, Tokyo, 157-8535, Japan.
Nobutaka KiyokawaNational Research Institute for Child Health and Development, Tokyo, 157-8535, Japan.
Jun-Ichiro FujimotoNational Research Institute for Child Health and Development, Tokyo, 157-8535, Japan.
Toshinori SatoDepartment of Biosciences and Informatics, Keio University, Kanagawa, 223-8522, Japan.
Akihiro UmezawaNational Research Institute for Child Health and Development, Tokyo, 157-8535, Japan.
National Center For Child Health and Development · JPKeio University · JPTokyo Metropolitan Institute of Gerontology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glycosphingolipids (GSLs) are glycoconjugates that function as mediators of cell adhesion and modulators of signal transduction. Some well-defined markers of undifferentiated human embryonic stem cells (hESCs) and human induced pluripotent stem cells (hiPSCs) are glycoconjugates, such as SSEA-3, SSEA-4, TRA-1-60 and TRA-1-81. However, Comprehensive GSL profiles of hiPSCs have not yet been elucidated. The global images of GSLs from the parental cells, hiPSCs, and differentiated cells revealed that there are parental cell-independent specific glycolipids, including Globo H (fucosyl-Gb5Cer) and H type1 antigen (fucosyl-Lc4Cer) that are novel markers for undifferentiated hiPSCs. Interestingly, undifferentiated hiPSCs expressed H type 1 antigen, specific for blood type O, regardless of the cells' genotypes. Thus, in this study, we defined the dynamics of GSL remodeling during reprogramming from parental cell sets to iPSC sets and thence to iPSC-neural cells.

Indexed as

Cell DifferentiationABO Blood-Group SystemBiomarkersCell LineChromatography, LiquidEmbryoid BodiesFlow CytometryGenetic VariationGenotypeGlycolipidsGlycosphingolipidsHumansImmunohistochemistryInduced Pluripotent Stem CellsNeural Stem CellsPolysaccharidesABO Blood-Group SystemBiomarkersGlycolipidsGlycosphingolipidsPolysaccharides

Identifiers

PMID26477663
PMCPMC4609952
OpenAlexW1758179373

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.