Evidence map›Paper›PMID 26477645›Full record

ArticleScientific reports2015

A novel IgY-Aptamer hybrid system for cost-effective detection of SEB and its evaluation on food and clinical samples.

Venkataramana Mudili, Shivakiran S Makam, Naveen Sundararaj, Chandranayaka Siddaiah, Vijai Kumar Gupta, Putcha V Lakshmana Rao

RetractedOpen access · goldAbstract readRetracted Publication
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. Isolation and identification of enterotoxigenicJournal of food science and technology · 2019
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Venkataramana MudiliDRDO-BU-CLS, Bharathiar University Campus, Coimbatore, Tamil Nadu- 641046, India.
Shivakiran S MakamDRDO-BU-CLS, Bharathiar University Campus, Coimbatore, Tamil Nadu- 641046, India.
Naveen SundararajDRDO-BU-CLS, Bharathiar University Campus, Coimbatore, Tamil Nadu- 641046, India.
Chandranayaka SiddaiahDOS in Biotechnology, University of Mysore, Manasagangotri, Mysore, India.
Vijai Kumar GuptaMolecular Glyco-biotechnology Group, Discipline of Biochemistry, School of Natural Sciences, National University of Ireland Galway, Galway, Ireland.
Putcha V Lakshmana RaoDRDO-BU-CLS, Bharathiar University Campus, Coimbatore, Tamil Nadu- 641046, India.
Bharathiar University · INOllscoil na Gaillimhe – University of Galway · IEUniversity of Mysore · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the present study, we introduce a novel hybrid sandwich-ALISA employing chicken IgY and ssDNA aptamers for the detection of staphylococcal enterotoxin B (SEB). Cloning, expression and purification of the full length recombinant SEB was carried out. Anti-SEB IgY antibodies generated by immunizing white leg-horn chickens with purified recombinant SEB protein and were purified from the immunized egg yolk. Simultaneously, ssDNA aptamers specific to the toxin were prepared by SELEX method on microtiter well plates. The sensitivity levels of both probe molecules i.e., IgY and ssDNA aptamers were evaluated. We observed that the aptamer at 250 ngmL(-1) concentration could detect the target antigen at 50 ngmL(-1) and the IgY antibodies at 250 ngmL(-1), could able to detect 100 ngmL(-1) antigen. We further combined both the probes to prepare a hybrid sandwich aptamer linked immune sorbent assay (ALISA) wherein the IgY as capturing molecule and biotinylated aptamer as revealing probe. Limit of detection (LOD) for the developed method was determined as 50 ngmL(-1). Further, developed method was evaluated with artificially SEB spiked milk and natural samples and obtained results were validated with PCR. In conclusion, developed ALISA method may provide cost-effective and robust detection of SEB from food and environmental samples.

Indexed as

Aptamers, NucleotideAnimalsChickensCloning, MolecularCost-Benefit AnalysisEnterotoxinsEnzyme-Linked Immunosorbent AssayGene ExpressionHumansImmunoglobulinsNucleic Acid ConformationRecombinant ProteinsSELEX Aptamer TechniqueSensitivity and SpecificityStaphylococcal Food PoisoningStaphylococcal InfectionsAptamers, Nucleotideenterotoxin B, staphylococcalEnterotoxinsIgYImmunoglobulinsRecombinant Proteins

Identifiers

PMID26477645
PMCPMC4609960
OpenAlexW2410422868

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.