Evidence map›Paper›PMID 26477310›Full record

ArticleOncogene2016

Systematic integration of molecular profiles identifies miR-22 as a regulator of lipid and folate metabolism in breast cancer cells.

C Koufaris, G N Valbuena, Y Pomyen, G D Tredwell, E Nevedomskaya, C-He Lau, T Yang, A Benito, J K Ellis, H C Keun

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 65 citations in OpenAlex.

  1. Trial
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  3. MTHFD2: A Retrospective and a Glance into the Future.International journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

C KoufarisDivision of Cancer, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital, London, UK.
G N ValbuenaDivision of Cancer, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital, London, UK.
Y PomyenDivision of Cancer, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital, London, UK.
G D TredwellDivision of Cancer, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital, London, UK.
E NevedomskayaCenter for Proteomics and Metabolomics, Leiden University Medical Center, Leiden, The Netherlands.
C-He LauDivision of Cancer, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital, London, UK.
T YangDivision of Cancer, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital, London, UK.
A BenitoDivision of Cancer, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital, London, UK.
J K EllisDivision of Cancer, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital, London, UK.
H C KeunDivision of Cancer, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital, London, UK.
Imperial College London · GBHammersmith Hospital · GBChulabhorn Research Institute · THCyprus Institute of Neurology and Genetics · CYLeiden University Medical Center · NL

Funding

Biotechnology and Biological Sciences Research Council BB/F529270/1Cancer Research UK A15115
6 · The paper itself

Abstract

Dysregulated microRNA (miRNA) mediate malignant phenotypes, including metabolic reprogramming. By performing an integrative analysis of miRNA and metabolome data for the NCI-60 cell line panel, we identified an miRNA cluster strongly associated with both c-Myc expression and global metabolic variation. Within this cluster the cancer-associated and cardioprotective miR-22 was shown to repress fatty acid synthesis and elongation in tumour cells by targeting ATP citrate lyase and fatty acid elongase 6, as well as impairing mitochondrial one-carbon metabolism by suppression of methylene tetrahydrofolate dehydrogenase/cyclohydrolase. Across several data sets, expression of these target genes were associated with poorer outcomes in breast cancer patients. Importantly, a beneficial effect of miR-22 on clinical outcomes in breast cancer was shown to depend on the expression levels of the identified target genes, demonstrating the relevance of miRNA/mRNA interactions to disease progression in vivo. Our systematic analysis establishes miR-22 as a novel regulator of tumour cell metabolism, a function that could contribute to the role of this miRNA in cellular differentiation and cancer development. Moreover, we provide a paradigmatic example of effect modification in outcome analysis as a consequence of miRNA-directed gene targeting, a phenomenon that could be exploited to improve patient prognosis and treatment.

Indexed as

Breast NeoplasmsDown-RegulationFemaleFolic AcidHumansLipid MetabolismMCF-7 CellsMicroRNAsFolic AcidMicroRNAsMIRN22 microRNA, human

Identifiers

PMID26477310
OpenAlexW1752520412

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.