Evidence map›Paper›PMID 26476413›Full record

ArticleInsect biochemistry and molecular biology2015

Probing the chemical mechanism and critical regulatory amino acid residues of Drosophila melanogaster arylalkylamine N-acyltransferase like 2.

Daniel R Dempsey, Anne-Marie Carpenter, Santiago Rodriguez Ospina, David J Merkler

Open access · greenAbstract read
In one paragraph

Article in Insect biochemistry and molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Self-DNA inMolecules (Basel, Switzerland) · 2024
    Article
  2. Self-DNA Inhibition inBiology · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Insect ArylalkylamineFrontiers in molecular biosciences · 2018
    Review
  8. Insect ArylalkylamineBiochemistry & molecular biology journal · 2018
    Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Daniel R DempseyDepartment of Chemistry, University of South Florida, Tampa, FL, 33620, USA.
Anne-Marie CarpenterDepartment of Chemistry, University of South Florida, Tampa, FL, 33620, USA.
Santiago Rodriguez OspinaDepartment of Chemistry, University of South Florida, Tampa, FL, 33620, USA.
David J MerklerDepartment of Chemistry, University of South Florida, Tampa, FL, 33620, USA. Electronic address: merkler@usf.edu.
University of South Florida · US

Funding

Subtraction LipidomicsR15GM107864 · NIGMS · UNIVERSITY OF SOUTH FLORIDA · PI MERKLER, DAVID J · 2015 to 2017
$386k
Glycine N-AcyltransferasesR03DA034323 · NIDA · UNIVERSITY OF SOUTH FLORIDA · PI MERKLER, DAVID J · 2012 to 2013
$136k
NIDA NIH HHS R03 DA034323NIDA NIH HHS R03-DA034323NIGMS NIH HHS R15 GM107864NIGMS NIH HHS R15-GM107864
6 · The paper itself

Abstract

Arylalkylamine N-acyltransferase like 2 (AANATL2) catalyzes the formation of N-acylarylalkylamides from the corresponding acyl-CoA and arylalkylamine. The N-acylation of biogenic amines in Drosophila melanogaster is a critical step for the inactivation of neurotransmitters, cuticle sclerotization, and melatonin biosynthesis. In addition, D. melanogaster has been used as a model system to evaluate the biosynthesis of fatty acid amides: a family of potent cell signaling lipids. We have previously showed that AANATL2 catalyzes the formation of N-acylarylakylamides, including long-chain N-acylserotonins and N-acyldopamines. Herein, we define the kinetic mechanism for AANATL2 as an ordered sequential mechanism with acetyl-CoA binding first followed by tyramine to generate the ternary complex prior to catalysis. Bell shaped kcat,app - acetyl-CoA and (kcat/Km)app - acetyl-CoA pH-rate profiles identified two apparent pKa,app values of ∼7.4 and ∼8.9 that are critical to catalysis, suggesting the AANATL2-catalyzed formation of N-acetyltyramine occurs through an acid/base chemical mechanism. Site-directed mutagenesis of a conserved glutamate that corresponds to the catalytic base for other D. melanogaster AANATL enzymes did not produce a substantial depression in the kcat,app value nor did it abolish the pKa,app value attributed to the general base in catalysis (pKa ∼7.4). These data suggest that AANATL2 catalyzes the formation of N-acylarylalkylamides using either different catalytic residues or a different chemical mechanism relative to other D. melanogaster AANATL enzymes. In addition, we constructed other site-directed mutants of AANATL2 to help define the role of targeted amino acids in substrate binding and/or enzyme catalysis.

Indexed as

Acetyl Coenzyme AAcyltransferasesAmino AcidsAnimalsCatalysisDrosophila melanogasterDrosophila ProteinsKineticsMutagenesis, Site-DirectedTyramineAANATL2 protein, DrosophilaAcetyl Coenzyme AAcyltransferasesAmino AcidsDrosophila ProteinsTyramineAANATL2Chemical mechanismN-acyldopaminesN-acylserotoninsStructure-function relationships

Identifiers

PMID26476413
PMCPMC4663176
OpenAlexW2185322013

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.