Evidence map›Paper›PMID 26474640›Full record

ArticlePlant physiology2015

The Translesion Polymerase ζ Has Roles Dependent on and Independent of the Nuclease MUS81 and the Helicase RECQ4A in DNA Damage Repair in Arabidopsis.

Sabrina Kobbe, Oliver Trapp, Alexander Knoll, Anja Manuss, Holger Puchta

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Plant DNA Polymerases.International journal of molecular sciences · 2019
    Review
  6. DNA- and DNA-Protein-Crosslink Repair in Plants.International journal of molecular sciences · 2019
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Repair of adjacent single-strand breaks is often accompanied by the formation of tandem sequence duplications in plant genomes.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sabrina KobbeBotanical Institute II, Karlsruhe Institute of Technology, 76187 Karlsruhe, Germany.ORCID http://orcid.org/0000-0001-9994-8210
Oliver TrappBotanical Institute II, Karlsruhe Institute of Technology, 76187 Karlsruhe, Germany.
Alexander KnollBotanical Institute II, Karlsruhe Institute of Technology, 76187 Karlsruhe, Germany.
Anja ManussBotanical Institute II, Karlsruhe Institute of Technology, 76187 Karlsruhe, Germany.ORCID http://orcid.org/0000-0002-1732-3290
Holger PuchtaBotanical Institute II, Karlsruhe Institute of Technology, 76187 Karlsruhe, Germany holger.puchta@kit.edu.
Karlsruhe Institute of Technology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA polymerase zeta catalytic subunit REV3 is known to play an important role in the repair of DNA damage induced by cross-linking and methylating agents. Here, we demonstrate that in Arabidopsis (Arabidopsis thaliana), the basic polymerase activity of REV3 is essential for resistance protection against these different types of damaging agents. Interestingly, its processivity is mainly required for resistance to interstrand and intrastrand cross-linking agents, but not alkylating agents. To better define the role of REV3 in relation to other key factors involved in DNA repair, we perform epistasis analysis and show that REV3-mediated resistance to DNA-damaging agents is independent of the replication damage checkpoint kinase ataxia telangiectasia-mutated and rad3-related homolog. REV3 cooperates with the endonuclease MMS and UV-sensitive protein81 in response to interstrand cross links and alkylated bases, whereas it acts independently of the ATP-dependent DNA helicase RECQ4A. Taken together, our data show that four DNA intrastrand cross-link subpathways exist in Arabidopsis, defined by ATP-dependent DNA Helicase RECQ4A, MMS and UV-sensitive protein81, REV3, and the ATPase Radiation Sensitive Protein 5A.

Indexed as

DNA DamageDNA RepairAmino Acid SequenceArabidopsisArabidopsis ProteinsDNA-Directed DNA PolymeraseDNA HelicasesDNA, PlantEndonucleasesGene Expression Regulation, PlantModels, GeneticMolecular Sequence DataMutationPlants, Genetically ModifiedReverse Transcriptase Polymerase Chain ReactionSignal TransductionArabidopsis ProteinsAtREV3 protein, ArabidopsisDNA-Directed DNA PolymeraseDNA HelicasesDNA, PlantDNA polymerase zetaEndonucleasesMUS81 protein, ArabidopsisRecQ4A protein, Arabidopsis

Identifiers

PMID26474640
PMCPMC4677884
OpenAlexW2180700523

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.