Evidence map›Paper›PMID 26473841›Full record

ArticleInternational journal of molecular sciences2015

Identification of Specific Variations in a Non-Motile Strain of Cyanobacterium Synechocystis sp. PCC 6803 Originated from ATCC 27184 by Whole Genome Resequencing.

Qinglong Ding, Gu Chen, Yuling Wang, Dong Wei

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Qinglong DingCollege of Light Industry and Food Sciences, South China University of Technology, 381 Wushan Road, 510641 Guangzhou, China. dingql21@126.com.
Gu ChenCollege of Light Industry and Food Sciences, South China University of Technology, 381 Wushan Road, 510641 Guangzhou, China. chengu@scut.edu.cn.
Yuling WangCollege of Light Industry and Food Sciences, South China University of Technology, 381 Wushan Road, 510641 Guangzhou, China. wang.yulingwyl@163.com.
Dong WeiCollege of Light Industry and Food Sciences, South China University of Technology, 381 Wushan Road, 510641 Guangzhou, China. fewd304@scut.edu.cn.
South China University of Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyanobacterium Synechocystis sp. PCC 6803 is a widely used model organism in basic research and biofuel biotechnology application. Here, we report the genomic sequence of chromosome and seven plasmids of a glucose-tolerant, non-motile strain originated from ATCC 27184, GT-G, in use at Guangzhou. Through high-throughput genome re-sequencing and verification by Sanger sequencing, eight novel variants were identified in its chromosome and plasmids. The eight novel variants, especially the five non-silent mutations might have interesting effects on the phenotype of GT-G strains, for example the truncated Sll1895 and Slr0322 protein. These resequencing data provide background information for further research and application based on the GT-G strain and also provide evidence to study the evolution and divergence of Synechocystis 6803 globally.

Indexed as

Base SequenceDNA, BacterialGenome, BacterialHigh-Throughput Nucleotide SequencingPlasmidsPolymorphism, Single NucleotideSequence Analysis, DNASynechocystisDNA, Bacterialdeletioninsertionsingle nucleotide polymorphismSynechocystis sp. PCC 6803whole genome resequencing

Identifiers

PMID26473841
PMCPMC4632739
OpenAlexW2143683586

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.