Evidence map›Paper›PMID 26472542›Full record

ArticleScientific reports2015

Novel insights from 3D models: the pivotal role of physical symmetry in epithelial organization.

Abhishek Kurup, Shreyas Ravindranath, Tim Tran, Mark Keating, Philippe Gascard, Lorenzo Valdevit, Thea D Tlsty, Elliot L Botvinick

Abstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. 3d Tissue Engineered In Vitro Models Of Cancer In Bone.ACS biomaterials science & engineering · 2018
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Abhishek KurupUniversity of California Irvine, Department of Biomedical Engineering, Irvine, USA.
Shreyas RavindranathUniversity of California Irvine, Department of Biomedical Engineering, Irvine, USA.
Tim TranUniversity of California Irvine, Department of Biomedical Engineering, Irvine, USA.
Mark KeatingUniversity of California Irvine, Department of Biomedical Engineering, Irvine, USA.
Philippe GascardUniversity of California San Francisco, Department of Pathology, San Francisco, USA.
Lorenzo ValdevitUniversity of California Irvine, Department of Mechanical and Aerospace Engineering, Irvine, USA.
Thea D TlstyUniversity of California San Francisco, Department of Pathology, San Francisco, USA.
Elliot L BotvinickUniversity of California Irvine, Department of Biomedical Engineering, Irvine, USA.

Funding

Uncover Strategies Used By Biological SystemsP50GM076516 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI NIE, QING · 2007 to 2016
$25.1M
TRANS_NETWORK PROJECTSU54CA143803 · NCI · PRINCETON UNIVERSITY · PI AUSTIN, ROBERT H. · 2009 to 2013
$14.2M
Virtual Photonocs TechnologiesP41EB015890 · NIBIB · UNIVERSITY OF CALIFORNIA-IRVINE · PI DURKIN, ANTHONY · 2012 to 2017
$7.0M
Training Program in Cardiovascular Applied Research and EntrepreneurshipT32HL116270 · NHLBI · UNIVERSITY OF CALIFORNIA-IRVINE · PI HUGHES, CHRISTOPHER C. W. · 2013 to 2022
$1.6M
Training Program in Systems Biology of DevelopmentT32HD060555 · NICHD · UNIVERSITY OF CALIFORNIA-IRVINE · PI LANDER, ARTHUR D · 2009 to 2013
$1.3M
NCI NIH HHS U54 CA143803NCI NIH HHS U54CA143803NHLBI NIH HHS T32 HL116270NIBIB NIH HHS P41 EB015890NIBIB NIH HHS P41-EB015890NICHD NIH HHS HD060555-05NICHD NIH HHS T32 HD060555NIGMS NIH HHS P50 GM076516
6 · The paper itself

Abstract

3D tissue culture models are utilized to study breast cancer and other pathologies because they better capture the complexity of in vivo tissue architecture compared to 2D models. However, to mimic the in vivo environment, the mechanics and geometry of the ECM must also be considered. Here, we studied the mechanical environment created in two 3D models, the overlay protocol (OP) and embedded protocol (EP). Mammary epithelial acini features were compared using OP or EP under conditions known to alter acinus organization, i.e. collagen crosslinking and/or ErbB2 receptor activation. Finite element analysis and active microrheology demonstrated that OP creates a physically asymmetric environment with non-uniform mechanical stresses in radial and circumferential directions. Further contrasting with EP, acini in OP displayed cooperation between ErbB2 signalling and matrix crosslinking. These differences in acini phenotype observed between OP and EP highlight the functional impact of physical symmetry in 3D tissue culture models.

Indexed as

Models, BiologicalBreast NeoplasmsCell Culture TechniquesCell Line, TumorCell MovementCollagenDrug CombinationsErb-b2 Receptor Tyrosine KinasesExtracellular MatrixFemaleFinite Element AnalysisHumansLamininOptical TweezersPhenotypeProteoglycansCollagenDrug CombinationsErb-b2 Receptor Tyrosine KinasesLamininmatrigelProteoglycans

Identifiers

PMID26472542
PMCPMC4608012

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.