Evidence map›Paper›PMID 26472407›Full record

ArticleThe British journal of ophthalmology2016

A novel homozygous truncating GNAT1 mutation implicated in retinal degeneration.

Matthew Carrigan, Emma Duignan, Pete Humphries, Arpad Palfi, Paul F Kenna, G Jane Farrar

Open access · hybridAbstract readCase Reports
In one paragraph

Article in The British journal of ophthalmology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 41 citations in OpenAlex.

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  4. ZebrafishInternational journal of molecular sciences · 2025
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  15. Next-Generation Sequencing Applications for Inherited Retinal Diseases.International journal of molecular sciences · 2021
    Review
  16. Deletion ofInternational journal of ophthalmology · 2021
    Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Matthew CarriganSchool of Genetics and Microbiology, Trinity College Dublin, Dublin, Ireland.
Emma DuignanResearch Foundation, Royal Victoria Eye & Ear Hospital, Dublin, Ireland.ORCID http://orcid.org/0000-0002-3968-4855
Pete HumphriesSchool of Genetics and Microbiology, Trinity College Dublin, Dublin, Ireland.
Arpad PalfiSchool of Genetics and Microbiology, Trinity College Dublin, Dublin, Ireland.
Paul F KennaSchool of Genetics and Microbiology, Trinity College Dublin, Dublin, Ireland Research Foundation, Royal Victoria Eye & Ear Hospital, Dublin, Ireland.
G Jane FarrarSchool of Genetics and Microbiology, Trinity College Dublin, Dublin, Ireland.
Trinity College Dublin · IERoyal Victoria Eye and Ear Hospital · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe GNAT1 gene encodes the α subunit of the rod transducin protein, a key element in the rod phototransduction cascade. Variants in GNAT1 have been implicated in stationary night-blindness in the past, but unlike other proteins in the same pathway, it has not previously been implicated in retinitis pigmentosa.

methodsA panel of 182 retinopathy-associated genes was sequenced to locate disease-causing mutations in patients with inherited retinopathies.

resultsSequencing revealed a novel homozygous truncating mutation in the GNAT1 gene in a patient with significant pigmentary disturbance and constriction of visual fields, a presentation consistent with retinitis pigmentosa. This is the first report of a patient homozygous for a complete loss-of-function GNAT1 mutation. The clinical data from this patient provide definitive evidence of retinitis pigmentosa with late onset in addition to the lifelong night-blindness that would be expected from a lack of transducin function.

conclusionThese data suggest that some truncating GNAT1 variants can indeed cause a recessive, mild, late-onset retinal degeneration in human beings rather than just stationary night-blindness as reported previously, with notable similarities to the phenotype of the Gnat1 knockout mouse.

Indexed as

Codon, NonsenseAdultAgedAged, 80 and overAmino Acid SequenceBase SequenceDNAElectroretinographyEye Diseases, HereditaryEye ProteinsFemaleGenetic Diseases, X-LinkedHeterotrimeric GTP-Binding ProteinsHigh-Throughput Nucleotide SequencingHumansMaleCodon, NonsenseDNAEye ProteinsGNAT1 protein, humanHeterotrimeric GTP-Binding ProteinsTransducinDegenerationGeneticsRetina

Identifiers

PMID26472407
PMCPMC4826887
OpenAlexW2264641920

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.