Evidence map›Paper›PMID 26471002›Full record

ArticleNature communications2015

Histone methyltransferase SETDB1 regulates liver cancer cell growth through methylation of p53.

Qi Fei, Ke Shang, Jianhua Zhang, Shannon Chuai, Desheng Kong, Tianlun Zhou, Shijun Fu, Ying Liang, Chong Li, Zhi Chen and 16 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed, 161 citations in OpenAlex.

  1. Article
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  7. The Many Faces of SetDB1.Epigenomes · 2026
    Review
  8. Dual Aptamers-Based SETDB1 PROTACs as Effective Anti-Tumor Strategies for Breast Cancer.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
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28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 2 institutions in 1 country.

Qi FeiNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Ke ShangNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Jianhua ZhangNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Shannon ChuaiNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Desheng KongNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Tianlun ZhouNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Shijun FuNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Ying LiangNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Chong LiNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Zhi ChenNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Yuan ZhaoNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Zhengtian YuNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Zheng HuangNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Min HuNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Haiyan YingNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Zhui ChenNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Yun ZhangNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Feng XingNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Jidong ZhuNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Haiyan XuNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Kehao ZhaoNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Chris LuNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Peter AtadjaNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Zhi-Xiong XiaoCollege of Life Sciences, Sichuan University, Chengdu 610064, China.
En LiNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Jianyong ShouNovartis Institutes for BioMedical Research, Shanghai 201203, China.
Novartis (China) · CNSichuan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SETDB1 is a histone H3K9 methyltransferase that has a critical role in early development. It is located within a melanoma susceptibility locus and facilitates melanoma formation. However, the mechanism by which SETDB1 regulates tumorigenesis remains unknown. Here we report the molecular interplay between SETDB1 and the well-known hotspot gain-of-function (GOF) TP53 R249S mutation. We show that in hepatocellular carcinoma (HCC) SETDB1 is overexpressed with moderate copy number gain, and GOF TP53 mutations including R249S associate with this overexpression. Inactivation of SETDB1 in HCC cell lines bearing the R249S mutation suppresses cell growth. The TP53 mutation status renders cancer cells dependent on SETDB1. Moreover, SETDB1 forms a complex with p53 and catalyses p53K370 di-methylation. SETDB1 attenuation reduces the p53K370me2 level, which subsequently leads to increased recognition and degradation of p53 by MDM2. Together, we provide both genetic and biochemical evidence for a mechanism by which SETDB1 regulates cancer cell growth via methylation of p53.

Indexed as

Genes, p53AnimalsCarcinoma, HepatocellularDNA Copy Number VariationsHCT116 CellsHistone-Lysine N-MethyltransferaseHumansLiver Neoplasms, ExperimentalMice, NudeProtein MethyltransferasesTumor Suppressor Protein p53Histone-Lysine N-MethyltransferaseProtein MethyltransferasesSETDB1 protein, humanTumor Suppressor Protein p53

Identifiers

PMID26471002
PMCPMC5426523
OpenAlexW2261840500

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.