Evidence map›Paper›PMID 26468882›Full record

ArticlePLoS genetics2015

Establishment of a Developmental Compartment Requires Interactions between Three Synergistic Cis-regulatory Modules.

Dimitri Bieli, Oguz Kanca, David Requena, Fisun Hamaratoglu, Daryl Gohl, Paul Schedl, Markus Affolter, Matthew Slattery, Martin Müller, Carlos Estella

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The wing imaginal disc.Genetics · 2022
    Article
  8. Article
  9. Article
  10. Role of the Forkhead Transcription Factors Fd4 and Fd5 DuringFrontiers in cell and developmental biology · 2021
    Article
  11. Article
  12. Article
  13. Damage-responsive elements inGenome research · 2018
    Article
  14. Article
  15. Specification and Patterning ofJournal of developmental biology · 2018
    Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Dimitri BieliBiozentrum, University of Basel, Basel, Switzerland.
Oguz KancaBiozentrum, University of Basel, Basel, Switzerland.
David RequenaDepartamento de Biología Molecular and Centro de Biología Molecular Severo Ochoa, Universidad Autónoma de Madrid (UAM), Madrid, Spain.
Fisun HamaratogluCenter for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.
Daryl GohlDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.
Paul SchedlDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.
Markus AffolterBiozentrum, University of Basel, Basel, Switzerland.
Matthew SlatteryDepartment of Biomedical Sciences, University of Minnesota Medical School. Duluth, Minnesota, United States of America.
Martin MüllerBiozentrum, University of Basel, Basel, Switzerland.
Carlos EstellaDepartamento de Biología Molecular and Centro de Biología Molecular Severo Ochoa, Universidad Autónoma de Madrid (UAM), Madrid, Spain.
University of Basel · CHPrinceton University · USCentro de Biología Molecular Severo Ochoa · ESUniversidad Autónoma de Madrid · ESUniversity of Lausanne · CHUniversity of Minnesota, Duluth · US

Funding

MOLECULAR AND GENETIC ANALYSIS OF CHROMATIN STRUCTURER01GM043432 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 1990 to 2017
$5.8M
NIGMS NIH HHS R01 GM043432
6 · The paper itself

Abstract

The subdivision of cell populations in compartments is a key event during animal development. In Drosophila, the gene apterous (ap) divides the wing imaginal disc in dorsal vs ventral cell lineages and is required for wing formation. ap function as a dorsal selector gene has been extensively studied. However, the regulation of its expression during wing development is poorly understood. In this study, we analyzed ap transcriptional regulation at the endogenous locus and identified three cis-regulatory modules (CRMs) essential for wing development. Only when the three CRMs are combined, robust ap expression is obtained. In addition, we genetically and molecularly analyzed the trans-factors that regulate these CRMs. Our results propose a three-step mechanism for the cell lineage compartment expression of ap that includes initial activation, positive autoregulation and Trithorax-mediated maintenance through separable CRMs.

Indexed as

AnimalsBody PatterningCell LineageDrosophila melanogasterDrosophila ProteinsEnhancer Elements, GeneticGene Expression Regulation, DevelopmentalHomeodomain ProteinsImaginal DiscsLIM-Homeodomain ProteinsRegulatory Elements, TranscriptionalRegulatory Sequences, Nucleic AcidTranscription FactorsWings, Animalap protein, DrosophilaDrosophila ProteinsEn protein, DrosophilaHomeodomain ProteinsLIM-Homeodomain ProteinsTranscription Factors

Identifiers

PMID26468882
PMCPMC4607503
OpenAlexW2100183907

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.