Evidence map›Paper›PMID 26468675›Full record

ArticleNature communications2015

Single-molecule spectroscopy exposes hidden states in an enzymatic electron relay.

Iris Grossman, Haim Yuval Aviram, Gad Armony, Amnon Horovitz, Hagen Hofmann, Gilad Haran, Deborah Fass

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Single-Molecule FRET of Membrane Transport Proteins.Chembiochem : a European journal of chemical biology · 2021
    Review
  3. Membrane Chemistry Tunes the Structure of a Peptide Transporter.Angewandte Chemie (International ed. in English) · 2020
    Article
  4. Article
  5. Review
  6. Slow domain reconfiguration causes power-law kinetics in a two-state enzyme.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Iris GrossmanDepartment of Structural Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Haim Yuval AviramDepartment of Chemical Physics, Weizmann Institute of Science, Rehovot 7610001, Israel.
Gad ArmonyDepartment of Structural Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Amnon HorovitzDepartment of Structural Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Hagen HofmannDepartment of Structural Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Gilad HaranDepartment of Chemical Physics, Weizmann Institute of Science, Rehovot 7610001, Israel.
Deborah FassDepartment of Structural Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Weizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ability to query enzyme molecules individually is transforming our view of catalytic mechanisms. Quiescin sulfhydryl oxidase (QSOX) is a multidomain catalyst of disulfide-bond formation that relays electrons from substrate cysteines through two redox-active sites to molecular oxygen. The chemical steps in electron transfer have been delineated, but the conformational changes accompanying these steps are poorly characterized. Here we use single-molecule Förster resonance energy transfer (smFRET) to probe QSOX conformation in resting and cycling enzyme populations. We report the discovery of unanticipated roles for conformational changes in QSOX beyond mediating electron transfer between redox-active sites. In particular, a state of the enzyme not previously postulated or experimentally detected is shown to gate, via a conformational transition, the entrance into a sub-cycle within an expanded QSOX kinetic scheme. By tightly constraining mechanistic models, smFRET data can reveal the coupling between conformational and chemical transitions in complex enzymatic cycles.

Indexed as

Fluorescence Resonance Energy TransferElectron TransportOxidoreductases Acting on Sulfur Group DonorsProtein ConformationProtozoan ProteinsOxidoreductases Acting on Sulfur Group DonorsProtozoan Proteinsquiescin sulfhydryl oxidase, Trypanosoma brucei

Identifiers

PMID26468675
PMCPMC4634331
OpenAlexW2254447652

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.