Evidence map›Paper›PMID 26465609›Full record

ArticlePloS one2015

Phylogenomic Analyses Support Traditional Relationships within Cnidaria.

Felipe Zapata, Freya E Goetz, Stephen A Smith, Mark Howison, Stefan Siebert, Samuel H Church, Steven M Sanders, Cheryl Lewis Ames, Catherine S McFadden, Scott C France and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
34.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 219 citations in OpenAlex.

  1. Article
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  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. The Palaeobiology of Two Crown Group Cnidarians:Life (Basel, Switzerland) · 2024
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. The genome of the deep-sea anemoneProceedings. Biological sciences · 2023
    Article
  19. Review
  20. Article

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 1 country.

Felipe ZapataDepartment of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island, United States of America.
Freya E GoetzDepartment of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island, United States of America.
Stephen A SmithDepartment of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island, United States of America.
Mark HowisonDepartment of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island, United States of America; Computing and Information Services, Brown University, Providence, Rhode Island, United States of America.
Stefan SiebertDepartment of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island, United States of America.
Samuel H ChurchDepartment of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island, United States of America.
Steven M SandersDepartment of Ecology and Evolutionary Biology, University of Kansas, Lawrence, Kansas, United States of America.
Cheryl Lewis AmesDepartment of Invertebrate Zoology, Smithsonian Museum of Natural History, Washington District of Columbia, United States of America; Biological Sciences Graduate Program, University of Maryland, College Park, Maryland, United States of America.
Catherine S McFaddenDepartment of Biology, Harvey Mudd College, Claremont, California, United States of America.
Scott C FranceDepartment of Biology, The University of Louisiana at Lafayette, Lafayette, Louisiana, United States of America.
Marymegan DalyDepartment of Evolution, Ecology and Organismal Biology, Ohio State University, Columbus, Ohio, United States of America.
Allen G CollinsDepartment of Invertebrate Zoology, Smithsonian Museum of Natural History, Washington District of Columbia, United States of America; National Systematics Laboratory of NOAA's Fisheries Service, National Museum of Natural History, Washington, District of Columbia, United States of America.
Steven H D HaddockMonterey Bay Aquarium Research Institute, Moss Landing, California, United States of America.
Casey W DunnDepartment of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island, United States of America.
Paulyn CartwrightDepartment of Ecology and Evolutionary Biology, University of Kansas, Lawrence, Kansas, United States of America.
Brown University · USNational Museum of Natural History · USUniversity of Kansas · USHarvey Mudd College · USMonterey Bay Aquarium Research Institute · USThe Ohio State University · USUniversity of Louisiana at Lafayette · US

Funding

CENTER FOR CANCER SIGNALING NETWORKSP30RR031153 · NCRR · BROWN UNIVERSITY · PI ATWOOD, WALTER J · 2011 to 2011
$1.1M
NCRR NIH HHS P30 RR031153
6 · The paper itself

Abstract

Cnidaria, the sister group to Bilateria, is a highly diverse group of animals in terms of morphology, lifecycles, ecology, and development. How this diversity originated and evolved is not well understood because phylogenetic relationships among major cnidarian lineages are unclear, and recent studies present contrasting phylogenetic hypotheses. Here, we use transcriptome data from 15 newly-sequenced species in combination with 26 publicly available genomes and transcriptomes to assess phylogenetic relationships among major cnidarian lineages. Phylogenetic analyses using different partition schemes and models of molecular evolution, as well as topology tests for alternative phylogenetic relationships, support the monophyly of Medusozoa, Anthozoa, Octocorallia, Hydrozoa, and a clade consisting of Staurozoa, Cubozoa, and Scyphozoa. Support for the monophyly of Hexacorallia is weak due to the equivocal position of Ceriantharia. Taken together, these results further resolve deep cnidarian relationships, largely support traditional phylogenetic views on relationships, and provide a historical framework for studying the evolutionary processes involved in one of the most ancient animal radiations.

Indexed as

PhylogenyAnimalsAnthozoaBayes TheoremBiological EvolutionCubozoaHydrozoaMyxozoaScyphozoaTranscriptome

Identifiers

PMID26465609
PMCPMC4605497
OpenAlexW2951822473

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.