Evidence map›Paper›PMID 26464513›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Structure and assembly of the mouse ASC inflammasome by combined NMR spectroscopy and cryo-electron microscopy.

Lorenzo Sborgi, Francesco Ravotti, Venkata P Dandey, Mathias S Dick, Adam Mazur, Sina Reckel, Mohamed Chami, Sebastian Scherer, Matthias Huber, Anja Böckmann and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 95 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
95citing papers in PubMed, 1 pooled it
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

95 citing papers in PubMed, 1 synthesis or guideline pooled it, 159 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. An overview of human inflammasomes: Activation and regulation.Journal of immunology (Baltimore, Md. : 1950) · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. A structural atlas of death domain fold proteins reveals their versatile roles in biology and function.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Review
  12. Article
  13. Analysis of the structure and interactions of the SARS-CoV-2 ORF7b accessory protein.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. Review
  15. Mechanistic insights from inflammasome structures.Nature reviews. Immunology · 2024
    Review
  16. NLRP inflammasomes in health and disease.Molecular biomedicine · 2024
    Review
  17. Molecular basis for curvature formation in SepF polymerization.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  18. Article
  19. Article
  20. Review

35 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Lorenzo SborgiBiozentrum, University of Basel, 4056 Basel, Switzerland;
Francesco RavottiPhysical Chemistry, Swiss Federal Institute of Technology in Zurich, 8093 Zurich, Switzerland;
Venkata P DandeyCenter for Cellular Imaging and NanoAnalytics, Biozentrum, University of Basel, 4058 Basel, Switzerland;
Mathias S DickBiozentrum, University of Basel, 4056 Basel, Switzerland;
Adam MazurBiozentrum, University of Basel, 4056 Basel, Switzerland; Research IT, Biozentrum, University of Basel, 4056 Basel, Switzerland;
Sina ReckelBiozentrum, University of Basel, 4056 Basel, Switzerland;
Mohamed ChamiCenter for Cellular Imaging and NanoAnalytics, Biozentrum, University of Basel, 4058 Basel, Switzerland;ORCID http://orcid.org/0000-0002-8733-055X
Sebastian SchererCenter for Cellular Imaging and NanoAnalytics, Biozentrum, University of Basel, 4058 Basel, Switzerland;
Matthias HuberPhysical Chemistry, Swiss Federal Institute of Technology in Zurich, 8093 Zurich, Switzerland;
Anja BöckmannInstitute for the Biology and Chemistry of Proteins, 69367 Lyon, France;
Edward H EgelmanDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA 22908.
Henning StahlbergCenter for Cellular Imaging and NanoAnalytics, Biozentrum, University of Basel, 4058 Basel, Switzerland;
Petr BrozBiozentrum, University of Basel, 4056 Basel, Switzerland; petr.broz@unibas.ch beme@ethz.ch sebastian.hiller@unibas.ch.
Beat H MeierPhysical Chemistry, Swiss Federal Institute of Technology in Zurich, 8093 Zurich, Switzerland; petr.broz@unibas.ch beme@ethz.ch sebastian.hiller@unibas.ch.
Sebastian HillerBiozentrum, University of Basel, 4056 Basel, Switzerland; petr.broz@unibas.ch beme@ethz.ch sebastian.hiller@unibas.ch.ORCID http://orcid.org/0000-0002-6709-4684
University of Basel · CHETH Zurich · CHInstitut de Biologie et de Chimie des Protéines · FRUniversity of Virginia · US

Funding

Methods for the Analysis of Helical Macromolecular ComplexesR01EB001567 · NIBIB · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI EGELMAN, EDWARD H. · 2003 to 2014
$3.6M
NIBIB NIH HHS EB001567NIBIB NIH HHS R01 EB001567
6 · The paper itself

Abstract

Inflammasomes are multiprotein complexes that control the innate immune response by activating caspase-1, thus promoting the secretion of cytokines in response to invading pathogens and endogenous triggers. Assembly of inflammasomes is induced by activation of a receptor protein. Many inflammasome receptors require the adapter protein ASC [apoptosis-associated speck-like protein containing a caspase-recruitment domain (CARD)], which consists of two domains, the N-terminal pyrin domain (PYD) and the C-terminal CARD. Upon activation, ASC forms large oligomeric filaments, which facilitate procaspase-1 recruitment. Here, we characterize the structure and filament formation of mouse ASC in vitro at atomic resolution. Information from cryo-electron microscopy and solid-state NMR spectroscopy is combined in a single structure calculation to obtain the atomic-resolution structure of the ASC filament. Perturbations of NMR resonances upon filament formation monitor the specific binding interfaces of ASC-PYD association. Importantly, NMR experiments show the rigidity of the PYD forming the core of the filament as well as the high mobility of the CARD relative to this core. The findings are validated by structure-based mutagenesis experiments in cultured macrophages. The 3D structure of the mouse ASC-PYD filament is highly similar to the recently determined human ASC-PYD filament, suggesting evolutionary conservation of ASC-dependent inflammasome mechanisms.

Indexed as

Models, MolecularAnimalsApoptosis Regulatory ProteinsBlotting, WesternCARD Signaling Adaptor ProteinsCloning, MolecularCryoelectron MicroscopyInflammasomesMagnetic Resonance SpectroscopyMiceMice, KnockoutMicroscopy, ConfocalProtein ConformationApoptosis Regulatory ProteinsCARD Signaling Adaptor ProteinsInflammasomesPycard protein, mouseASC speckinflammationinnate immune responseprotein filamentprotein structure

Identifiers

PMID26464513
PMCPMC4629351
OpenAlexW2223158988

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.