Evidence map›Paper›PMID 26464360›Full record

ArticleG3 (Bethesda, Md.)2015

Identification of Genes Uniquely Expressed in the Germ-Line Tissues of the Jewel Wasp Nasonia vitripennis.

Patrick M Ferree, Christopher Fang, Mariah Mastrodimos, Bruce A Hay, Henry Amrhein, Omar S Akbari

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  5. CRISPR-Mediated Genome Engineering in Aedes aegypti.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Patrick M FerreeW. M. Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, Claremont, California 91711 pferree@kecksci.claremont.edu omar.akbari@UCR.edu.
Christopher FangW. M. Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, Claremont, California 91711.
Mariah MastrodimosW. M. Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, Claremont, California 91711.
Bruce A HayDivision of Biology and Biological Engineering (BBE), MC156-29, California Institute of Technology, Pasadena, California 91125.
Henry AmrheinDivision of Biology and Biological Engineering (BBE), MC156-29, California Institute of Technology, Pasadena, California 91125.
Omar S AkbariDepartment of Entomology, University of California, Riverside Center for Disease Vector Research, Institute for Integrative Genome Biology, University of California, Riverside, California 92521 pferree@kecksci.claremont.edu omar.akbari@UCR.edu.
Scripps College · USCalifornia Institute of Technology · USUniversity of California, Riverside · US

Funding

Synthetically engineering population control systems in vectors of human diseaseK22AI113060 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI AKBARI, OMAR SULTAN · 2015 to 2016
$270k
NIAID NIH HHS 5K22AI113060-02NIAID NIH HHS K22 AI113060
6 · The paper itself

Abstract

The jewel wasp Nasonia vitripennis is a rising model organism for the study of haplo-diploid reproduction characteristic of hymenopteran insects, which include all wasps, bees, and ants. We performed transcriptional profiling of the ovary, the female soma, and the male soma of N. vitripennis to complement a previously existing transcriptome of the wasp testis. These data were deposited into an open-access genome browser for visualization of transcripts relative to their gene models. We used these data to identify the assemblies of genes uniquely expressed in the germ-line tissues. We found that 156 protein-coding genes are expressed exclusively in the wasp testis compared with only 22 in the ovary. Of the testis-specific genes, eight are candidates for male-specific DNA packaging proteins known as protamines. We found very similar expression patterns of centrosome associated genes in the testis and ovary, arguing that de novo centrosome formation, a key process for development of unfertilized eggs into males, likely does not rely on large-scale transcriptional differences between these tissues. In contrast, a number of meiosis-related genes show a bias toward testis-specific expression, despite the lack of true meiosis in N. vitripennis males. These patterns may reflect an unexpected complexity of male gamete production in the haploid males of this organism. Broadly, these data add to the growing number of genomic and genetic tools available in N. vitripennis for addressing important biological questions in this rising insect model organism.

Indexed as

Gene ExpressionGenes, InsectAnimalsCluster AnalysisDiploidyFemaleGene Expression ProfilingGerm CellsHaploidyMaleOrgan SpecificityOvaryTestisTranscriptomeWaspschromatinNasoniaovarytestistranscriptome

Identifiers

PMID26464360
PMCPMC4683638
OpenAlexW2191582444

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.