Evidence map›Paper›PMID 26463459›Full record

ArticleScientific reports2015

Epigenetic silencing of the MUPCDH gene as a possible prognostic biomarker for cyst growth in ADPKD.

Yu Mi Woo, Yubin Shin, Jung-Ah Hwang, Young-Hwan Hwang, Sunyoung Lee, Eun Young Park, Hyun Kyung Kong, Hayne Cho Park, Yeon-Su Lee, Jong Hoon Park

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Review
  5. Review
  6. Recent Discoveries in Epigenetic Modifications of Polycystic Kidney Disease.International journal of molecular sciences · 2021
    Review
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Yu Mi WooDepartment of Biological Science, Sookmyung Women's University, Seoul, 140-742, Korea.
Yubin ShinDepartment of Biological Science, Sookmyung Women's University, Seoul, 140-742, Korea.
Jung-Ah HwangBranch of Cancer Genomics, Research Institute, National Cancer Center, Goyang-si, Gyeonggi-do, Korea.
Young-Hwan HwangDepartment of Internal Medicine, Eulji General Hospital, Seoul, 139-892, Korea.
Sunyoung LeeDepartment of Biological Science, Sookmyung Women's University, Seoul, 140-742, Korea.
Eun Young ParkDepartment of Biological Science, Sookmyung Women's University, Seoul, 140-742, Korea.
Hyun Kyung KongDepartment of Biological Science, Sookmyung Women's University, Seoul, 140-742, Korea.
Hayne Cho ParkDivision of Nephrology, Armed Forces Capital Hospital, Seongnam, Korea.
Yeon-Su LeeBranch of Cancer Genomics, Research Institute, National Cancer Center, Goyang-si, Gyeonggi-do, Korea.
Jong Hoon ParkDepartment of Biological Science, Sookmyung Women's University, Seoul, 140-742, Korea.
Sookmyung Women's University · KRNational Cancer Center · KRArmed Forces Capital Hospital · KREulji General Hospital · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although autosomal dominant polycystic kidney disease (ADPKD) is a common genetic disease, and is characterized by the formation of multiple fluid-filled cysts, which results in renal failure, early diagnosis and treatment of ADPKD have yet to be defined. Herein, we observed that the promoter region of the gene encoding mucin-like protocadherin (MUPCDH) was hypermethylated in the renal tissue of patients with ADPKD compared to non-ADPKD controls. Inversely, MUPCDH was significantly repressed in ADPKD, especially in cyst-lining cells. Our results indicate that aberrant methylation of MUPCDH promoter CpG islands may be negatively correlated with reduced expression level of MUPCDH and that this contributes to abnormal cell proliferation in ADPKD. It suggests that methylation status of MUPCDH promoter can be used as a novel epigenetic biomarker and a therapeutic target in ADPKD.

Indexed as

Cadherin Related ProteinsCadherinsEpigenesis, GeneticGene SilencingGenetic MarkersGenetic Predisposition to DiseaseHumansKidney Diseases, CysticPolycystic Kidney, Autosomal DominantPrognosisReproducibility of ResultsRisk AssessmentSensitivity and SpecificityCadherin Related ProteinsCadherinsCDHR5 protein, humanGenetic Markers

Identifiers

PMID26463459
PMCPMC4604459
OpenAlexW2427965965

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.