Evidence map›Paper›PMID 26462203›Full record

ArticlePloS one2015

Genetic Diversity of Plasmodium falciparum in Haiti: Insights from Microsatellite Markers.

Tamar E Carter, Halley Malloy, Alexandre Existe, Gladys Memnon, Yves St Victor, Bernard A Okech, Connie J Mulligan

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

  1. Territorial Persistence of ResidualTropical medicine and infectious disease · 2026
    Article
  2. Article
  3. Article
  4. Molecular epidemiology of continuedFrontiers in tropical diseases · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Tamar E CarterGenetics and Genomics Program, University of Florida, Gainesville, Florida, United States of America; Department of Anthropology, University of Florida, Gainesville, Florida, United States of America; Genetics Institute, University of Florida, Gainesville, Florida, United States of America.
Halley MalloyGenetics Institute, University of Florida, Gainesville, Florida, United States of America; Department of Medicinal Chemistry, University of Florida, Gainesville, Florida, United States of America.
Alexandre ExisteNational Public Health Laboratory, Port au Prince, Haiti.
Gladys MemnonHospital Saint Croix, Leogane, Haiti.
Yves St VictorBlanchard Clinic, Terre Noire, Haiti.
Bernard A OkechEmerging Pathogens Institute, University of Florida, Gainesville, Florida, United States of America; Department of Environmental and Global Health, University of Florida, Gainesville, Florida, United States of America.
Connie J MulliganDepartment of Anthropology, University of Florida, Gainesville, Florida, United States of America; Genetics Institute, University of Florida, Gainesville, Florida, United States of America.
University of Florida · USNEGES Foundation · HTTerre des Hommes · CHUniversity of Florida Health · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hispaniola, comprising Haiti and the Dominican Republic, has been identified as a candidate for malaria elimination. However, incomplete surveillance data in Haiti hamper efforts to assess the impact of ongoing malaria control interventions. Characteristics of the genetic diversity of Plasmodium falciparum populations can be used to assess parasite transmission, which is information vital to evaluating malaria elimination efforts. Here we characterize the genetic diversity of P. falciparum samples collected from patients at seven sites in Haiti using 12 microsatellite markers previously employed in population genetic analyses of global P. falciparum populations. We measured multiplicity of infections, level of genetic diversity, degree of population geographic substructure, and linkage disequilibrium (defined as non-random association of alleles from different loci). For low transmission populations like Haiti, we expect to see few multiple infections, low levels of genetic diversity, high degree of population structure, and high linkage disequilibrium. In Haiti, we found low levels of multiple infections (12.9%), moderate to high levels of genetic diversity (mean number of alleles per locus = 4.9, heterozygosity = 0.61), low levels of population structure (highest pairwise Fst = 0.09 and no clustering in principal components analysis), and moderate linkage disequilibrium (ISA = 0.05, P<0.0001). In addition, population bottleneck analysis revealed no evidence for a reduction in the P. falciparum population size in Haiti. We conclude that the high level of genetic diversity and lack of evidence for a population bottleneck may suggest that Haiti's P. falciparum population has been stable and discuss the implications of our results for understanding the impact of malaria control interventions. We also discuss the relevance of parasite population history and other host and vector factors when assessing transmission intensity from genetic diversity data.

Indexed as

Genetic VariationAllelesGene FrequencyGeographyHaitiHeterozygoteHumansLinkage DisequilibriumMalaria, FalciparumMicrosatellite RepeatsPlasmodium falciparumPopulation DynamicsPrincipal Component AnalysisSample Size

Identifiers

PMID26462203
PMCPMC4604141
OpenAlexW2331001974

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.