Evidence map›Paper›PMID 26461259›Full record

ArticlePloS one2015

Serotype Distribution, Antibiotic Resistance and Clonality of Streptococcus pneumoniae Isolated from Immunocompromised Patients in Tunisia.

Anis Raddaoui, Alexandra S Simões, Rekaya Baaboura, Sofia Félix, Wafa Achour, Tarek Ben Othman, Mohamed Béjaoui, Raquel Sá-Leão, Assia Ben Hassen

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03528759 (Streptococcus Pseudopneumoniae as an Emerging Respiratory Tract Pathogen at Assiut University Hospitals), which is not on this map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03528759 unknown statusnot on this mapstarted 2019, after this paper: background citation

Streptococcus Pseudopneumoniae as an Emerging Respiratory Tract Pathogen at Assiut University Hospitals

TypeobservationalSponsorAssiut UniversityRan2019 to 2019Enrolled100ConditionsPneumonia, Streptococcus Infection
3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Clinical microbiology reviews · 2025
    Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Clinical Characteristics, Antimicrobial Resistance, and Outcomes of Patients with Invasive Pneumococcal Disease in Ningxia Hui Autonomous Region, China, 2013-2021.The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2022
    Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Anis RaddaouiLaboratory of the National Bone Marrow Transplantation Centre, Bab Saadoun, Tunis, Tunisie; University of Carthage, Faculty of Sciences of Bizerte, Tunis, Tunisie.
Alexandra S SimõesLaboratory of Molecular Microbiology of Human Pathogens, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Oeiras, Portugal.
Rekaya BaabouraLaboratory of the National Bone Marrow Transplantation Centre, Bab Saadoun, Tunis, Tunisie; UR12ES02, Microbiologie de la Greffe de Moelle Osseuse, Université Tunis El Manar, 2092, Tunis, Tunisie.
Sofia FélixLaboratory of Molecular Microbiology of Human Pathogens, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Oeiras, Portugal.
Wafa AchourLaboratory of the National Bone Marrow Transplantation Centre, Bab Saadoun, Tunis, Tunisie; UR12ES02, Microbiologie de la Greffe de Moelle Osseuse, Université Tunis El Manar, 2092, Tunis, Tunisie.
Tarek Ben OthmanHematology Ward, National Bone Marrow Transplantation Centre, Bab Saadoun, Tunis, Tunisie.
Mohamed BéjaouiPediatric Immuno-hematology Ward, National Bone Marrow Transplantation Centre, Bab Saadoun, Tunis, Tunisie.
Raquel Sá-LeãoLaboratory of Molecular Microbiology of Human Pathogens, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Oeiras, Portugal.
Assia Ben HassenLaboratory of the National Bone Marrow Transplantation Centre, Bab Saadoun, Tunis, Tunisie; UR12ES02, Microbiologie de la Greffe de Moelle Osseuse, Université Tunis El Manar, 2092, Tunis, Tunisie.
Tunis El Manar University · TNUniversidade Nova de Lisboa · PTUniversity of Carthage · TN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPneumococcal disease, a major cause of morbidity and mortality globally, has higher incidence among young children, the elderly and the immunocompromised of all ages. In Tunisia, pneumococcal conjugate vaccines (PCVs) are not included in the national immunization program. Also, few studies have described the epidemiology of S. pneumoniae in this country and, in particular, no molecular typing studies have been performed. The aim of this study was to evaluate serotype distribution, antimicrobial resistance and clonality of Streptococcus pneumoniae isolated from neutropenic patients in Tunisia.

methodsFifty-nine S. pneumoniae were isolated from infection (n = 31) and colonization (n = 28) sites of patients (children and adults) attending the National Centre of Bone Marrow Transplantation in Tunis between 2005-2011. All isolates were characterized by serotype, antimicrobial resistance pattern and multilocus sequence typing (MLST).

resultsThe majority (66.1%) of the isolates belonged to five serotypes all included in PCVs: 6B, 9V, 14, 19F and 23F. The potential coverage of the 10-valent and 13-valent PCV was of 71.2% and 76.3% respectively. Resistance rates were very high and 69.5% of the isolates were multidrug resistant: non-susceptibility rates to penicillin, amoxicillin and cefotaxime were 66.1%, 40.7% and 27.1%, respectively; resistance rates to erythromycin, clindamycin, tetracycline, chloramphenicol and trimethoprim-sulfamethoxazole, were 69.5%, 61.0%, 37.3%, 22.0% and 67.8%, respectively. The most frequent serotypes had STs characteristic of multidrug resistant international clones known to be highly successful and important causes of pneumococcal infection: Spain 23F-ST81, France 9V/14-ST156, Spain 6B-ST90, 19F-ST320, and Portugal 19F-ST177.

conclusionsThe majority of S. pneumoniae strains recovered from immunocompromised patients in Tunisia are representatives of multidrug resistant pandemic clones that express serotypes targeted by PCVs. To contain the burden of pneumococcal disease and improve treatment choices among Tunisian immunocompromised patients PCVs should be offered to all of them.

Indexed as

Drug Resistance, MicrobialImmunocompromised HostAdolescentAdultAgedAnti-Infective AgentsChildChild, PreschoolClone CellsFemaleHumansInfantInfant, NewbornMaleMicrobial Sensitivity TestsMiddle AgedAnti-Infective Agents

Identifiers

PMID26461259
PMCPMC4604151
OpenAlexW1938283230

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.