Evidence map›Paper›PMID 26459602›Full record

ArticleThe Journal of cell biology2015

APPL endosomes are not obligatory endocytic intermediates but act as stable cargo-sorting compartments.

Inna Kalaidzidis, Marta Miaczynska, Marta Brewińska-Olchowik, Anna Hupalowska, Charles Ferguson, Robert G Parton, Yannis Kalaidzidis, Marino Zerial

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 97 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. IST1 regulates select recycling pathways.Traffic (Copenhagen, Denmark) · 2024
    Article
  7. Article
  8. Article
  9. The expression of Rab5 and its effect on invasion, migration and exosome secretion in triple negative breast cancer.The Korean journal of physiology & pharmacology : official journal of the Korean Physiological Society and the Korean Society of Pharmacology · 2023
    Article
  10. Article
  11. Host Cell Signatures of the Envelopment Site within Beta-Herpes Virions.International journal of molecular sciences · 2022
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Melanosome Biogenesis in the Pigmentation of Mammalian Skin.Integrative and comparative biology · 2021
    Review
  19. Revising Endosomal Trafficking under Insulin Receptor Activation.International journal of molecular sciences · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 4 countries.

Inna KalaidzidisMax Planck Institute of Molecular Cell Biology and Genetics, 01307 Dresden, Germany.
Marta MiaczynskaMax Planck Institute of Molecular Cell Biology and Genetics, 01307 Dresden, Germany International Institute of Molecular and Cell Biology, 02-109 Warsaw, Poland.
Marta Brewińska-OlchowikInternational Institute of Molecular and Cell Biology, 02-109 Warsaw, Poland Nencki Institute of Experimental Biology, 02-093 Warsaw, Poland.
Anna HupalowskaInternational Institute of Molecular and Cell Biology, 02-109 Warsaw, Poland.
Charles FergusonInstitute for Molecular Bioscience and Centre for Microscopy and Microanalysis, University of Queensland St. Lucia, Brisbane, Australia 4072.
Robert G PartonInstitute for Molecular Bioscience and Centre for Microscopy and Microanalysis, University of Queensland St. Lucia, Brisbane, Australia 4072.
Yannis KalaidzidisMax Planck Institute of Molecular Cell Biology and Genetics, 01307 Dresden, Germany Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, 119991 Moscow, Russia.
Marino ZerialMax Planck Institute of Molecular Cell Biology and Genetics, 01307 Dresden, Germany zerial@MPI-CBG.de.
International Institute of Molecular and Cell Biology · PLMax Planck Institute of Molecular Cell Biology and Genetics · DEUniversity of Queensland · AUInstytut Biologii Doświadczalnej im. Marcelego Nenckiego · PLLomonosov Moscow State University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Endocytosis allows cargo to enter a series of specialized endosomal compartments, beginning with early endosomes harboring Rab5 and its effector EEA1. There are, however, additional structures labeled by the Rab5 effector APPL1 whose role in endocytic transport remains unclear. It has been proposed that APPL1 vesicles are transport intermediates that convert into EEA1 endosomes. Here, we tested this model by analyzing the ultrastructural morphology, kinetics of cargo transport, and stability of the APPL1 compartment over time. We found that APPL1 resides on a tubulo-vesicular compartment that is capable of sorting cargo for recycling or degradation and that displays long lifetimes, all features typical of early endosomes. Fitting mathematical models to experimental data rules out maturation of APPL1 vesicles into EEA1 endosomes as a primary mechanism for cargo transport. Our data suggest instead that APPL1 endosomes represent a distinct population of Rab5-positive sorting endosomes, thus providing important insights into the compartmental organization of the early endocytic pathway.

Indexed as

EndocytosisAdaptor Proteins, Signal TransducingEndosomesHeLa CellsHumansProtein TransportAdaptor Proteins, Signal TransducingAPPL1 protein, human

Identifiers

PMID26459602
PMCPMC4602042
OpenAlexW2218495275

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.