Evidence map›Paper›PMID 26459556›Full record

ArticleJournal of bacteriology2015

Structural, Functional, and Immunogenic Insights on Cu,Zn Superoxide Dismutase Pathogenic Virulence Factors from Neisseria meningitidis and Brucella abortus.

Ashley J Pratt, Michael DiDonato, David S Shin, Diane E Cabelli, Cami K Bruns, Carol A Belzer, Andrew R Gorringe, Paul R Langford, Louisa B Tabatabai, J Simon Kroll and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Design of a new multi-epitope vaccine againstEpidemiology and infection · 2021
    Article
  4. Article
  5. Immune Response to MucosalFrontiers in immunology · 2019
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Multivalent Fusion DNA Vaccine againstBioMed research international · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 8 institutions in 2 countries.

Ashley J PrattDepartment of Integrative Structural and Computational Biology and The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California, USA Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Michael DiDonatoDepartment of Integrative Structural and Computational Biology and The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California, USA.
David S ShinDepartment of Integrative Structural and Computational Biology and The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California, USA Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Diane E CabelliChemistry Department, Brookhaven National Laboratory, Upton, New York, USA.
Cami K BrunsDepartment of Integrative Structural and Computational Biology and The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California, USA.
Carol A BelzerNational Animal Disease Center, Ruminant Diseases and Immunology, Ames, Iowa, USA.
Andrew R GorringePublic Health England, Porton Down, Salisbury, United Kingdom.
Paul R LangfordSection of Paediatrics, Department of Medicine, Imperial College London, St. Mary's Campus, London, England, United Kingdom.
Louisa B TabatabaiNational Animal Disease Center, Ruminant Diseases and Immunology, Ames, Iowa, USA.
J Simon KrollSection of Paediatrics, Department of Medicine, Imperial College London, St. Mary's Campus, London, England, United Kingdom.
John A TainerMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA Department of Molecular and Cellular Oncology, The University of Texas M. D. Anderson Cancer Center, Houston, Texas, USA.
Elizabeth D GetzoffDepartment of Integrative Structural and Computational Biology and The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California, USA edg@scripps.edu.
Scripps Research Institute · USNational Animal Disease Center · USBrookhaven National Laboratory · USImperial College London · GBLawrence Berkeley National Laboratory · USPublic Health England · GBSt Mary's Hospital · GBThe University of Texas MD Anderson Cancer Center · US

Funding

Training in Basic Research on Aging and Age-Related DiseaseT32AG000266 · NIA · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Lisa M Ellerby · 1998 to 2026
$13.8M
MINOS (Macromolecular Insights on Nucleic acids Optimized by Scattering)R01GM105404 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI TAINER, JOHN A. · 2012 to 2015
$2.1M
SUPEROXIDE DISMUTASE STRUCTURES AND LOU GEHRIGS DISEASER01GM039345 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI GETZOFF, ELIZABETH D, TAINER, JOHN A. · 1988 to 2013
$1.9M
Canadian Institutes of Health ResearchNIA NIH HHS NIH T32AG000266NIA NIH HHS T32 AG000266NIGMS NIH HHS R01 GM039345NIGMS NIH HHS R01GM039345NIGMS NIH HHS R01 GM105404NIGMS NIH HHS R01GM105404
6 · The paper itself

Abstract

unlabelledBacterial pathogens Neisseria meningitidis and Brucella abortus pose threats to human and animal health worldwide, causing meningococcal disease and brucellosis, respectively. Mortality from acute N. meningitidis infections remains high despite antibiotics, and brucellosis presents alimentary and health consequences. Superoxide dismutases are master regulators of reactive oxygen and general pathogenicity factors and are therefore therapeutic targets. Cu,Zn superoxide dismutases (SODs) localized to the periplasm promote survival by detoxifying superoxide radicals generated by major host antimicrobial immune responses. We discovered that passive immunization with an antibody directed at N. meningitidis SOD (NmSOD) was protective in a mouse infection model. To define the relevant atomic details and solution assembly states of this important virulence factor, we report high-resolution and X-ray scattering analyses of NmSOD and of SOD from B. abortus (BaSOD). The NmSOD structures revealed an auxiliary tetrahedral Cu-binding site bridging the dimer interface; mutational analyses suggested that this metal site contributes to protein stability, with implications for bacterial defense mechanisms. Biochemical and structural analyses informed us about electrostatic substrate guidance, dimer assembly, and an exposed C-terminal epitope in the NmSOD dimer. In contrast, the monomeric BaSOD structure provided insights for extending immunogenic peptide epitopes derived from the protein. These collective results reveal unique contributions of SOD to pathogenic virulence, refine predictive motifs for distinguishing SOD classes, and suggest general targets for antibacterial immune responses. The identified functional contributions, motifs, and targets distinguishing bacterial and eukaryotic SOD assemblies presented here provide a foundation for efforts to develop SOD-specific inhibitors of or vaccines against these harmful pathogens. IMPORTANCE: By protecting microbes against reactive oxygen insults, SODs aid survival of many bacteria within their hosts. Despite the ubiquity and conservation of these key enzymes, notable species-specific differences relevant to pathogenesis remain undefined. To probe mechanisms that govern the functioning of Neisseria meningitidis and Brucella abortus SODs, we used X-ray structures, enzymology, modeling, and murine infection experiments. We identified virulence determinants common to the two homologs, assembly differences, and a unique metal reservoir within meningococcal SOD that stabilizes the enzyme and may provide a safeguard against copper toxicity. The insights reported here provide a rationale and a basis for SOD-specific drug design and an extension of immunogen design to target two important pathogens that continue to pose global health threats.

Indexed as

AnimalsAntibodiesAntigen-Antibody ComplexBinding Sites, AntibodyBrucella abortusBrucella VaccineBrucellosisCrystallography, X-RayDisease Models, AnimalImmunization, PassiveMeningitis, MeningococcalMeningococcal VaccinesMiceNeisseria meningitidisSuperoxide DismutaseVirulence FactorsAntibodiesAntigen-Antibody ComplexBrucella VaccineMeningococcal VaccinesSuperoxide DismutaseVirulence Factors

Identifiers

PMID26459556
PMCPMC4652047
OpenAlexW2237169775

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.