Evidence map›Paper›PMID 26459243›Full record

ArticleBiology open2015

Depletion or over-expression of Sh3px1 results in dramatic changes in cell morphology.

Lawrence Hicks, Guojun Liu, Fiona P Ukken, Sumin Lu, Kathryn E Bollinger, Kate O'Connor-Giles, Graydon B Gonsalvez

Open access · goldAbstract read
In one paragraph

Article in Biology open, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Defining the ligand-dependent proximatome of the sigma 1 receptor.Frontiers in cell and developmental biology · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. IPIP27 Coordinates PtdIns(4,5)PCurrent biology : CB · 2019
    Article
  9. Regulation of SH3PX1 by dNedd4-long at theThe Journal of biological chemistry · 2019
    Article
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Lawrence HicksCellular Biology and Anatomy, Georgia Regents University, Augusta, GA 30912, USA.
Guojun LiuCellular Biology and Anatomy, Georgia Regents University, Augusta, GA 30912, USA.
Fiona P UkkenLaboratory of Genetics, and Laboratory of Cell and Molecular Biology, University of Wisconsin-Madison, Madison, WI 53706, USA.
Sumin LuCellular Biology and Anatomy, Georgia Regents University, Augusta, GA 30912, USA.
Kathryn E BollingerCellular Biology and Anatomy, Georgia Regents University, Augusta, GA 30912, USA James and Jean Culver Vision Discovery Institute, Georgia Regents University, Augusta, GA 30912, USA.
Kate O'Connor-GilesLaboratory of Genetics, and Laboratory of Cell and Molecular Biology, University of Wisconsin-Madison, Madison, WI 53706, USA.
Graydon B GonsalvezCellular Biology and Anatomy, Georgia Regents University, Augusta, GA 30912, USA ggonsalvez@gru.edu.
Augusta University · USUniversity of Wisconsin–Madison · USDiscovery Institute · USGeorgia Regents Medical Center · US

Funding

A molecular examination of mRNA localization and cell polarizationR01GM100088 · NIGMS · AUGUSTA UNIVERSITY · PI GONSALVEZ, GRAYDON · 2013 to 2021
$2.7M
NIGMS NIH HHS R01 GM100088
6 · The paper itself

Abstract

The mammalian Sorting Nexin 9 (Snx9) family consists of three paralogs: Snx9, Snx18 and Snx33. Most of the published literature to date has centered on the role of Snx9 in clathrin-mediated endocytosis (CME). Snx9 contains an Sh3 domain at its N-terminus and has been shown to interact with Dynamin and actin nucleation factors via this domain. In addition to the Sh3 domain, Snx9 also contains a C-terminal BAR domain. BAR domains are known to sense and/or induce membrane curvature. In addition to endocytosis, recent studies have implicated the Snx9 family in diverse processes such as autophagy, macropinocytosis, phagocytosis and mitosis. The Snx9 family is encoded by a single gene in Drosophila called sh3px1. In this report, we present our initial characterization of sh3px1. We found that depletion of Sh3px1 from Drosophila Schneider 2 (S2) cells resulted in defective lamellipodia formation. A similar phenotype has been reported upon depletion of Scar, the actin nucleation factor implicated in forming lamellipodia. In addition, we demonstrate that over-expression of Sh3px1 in S2 cells results in the formation of tubules as well as long protrusions. Formation of these structures required the C-terminal BAR domain as well as the adjacent Phox homology (PX) domain of Sh3px1. Furthermore, efficient protrusion formation by Sh3px1 required the actin nucleation factor Wasp. Tubules and protrusions were also generated upon over-expressing the mammalian orthologs Snx18 and Snx33 in S2 cells. By contrast, over-expressing Snx9 mostly induced long tubules.

Indexed as

Actin nucleationBAR domainLamellipodiaProtrusionSorting nexinTubule

Identifiers

PMID26459243
PMCPMC4728355
OpenAlexW2277761135

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.