Evidence map›Paper›PMID 26458101›Full record

ArticleNature2015

Gating machinery of InsP3R channels revealed by electron cryomicroscopy.

Guizhen Fan, Matthew L Baker, Zhao Wang, Mariah R Baker, Pavel A Sinyagovskiy, Wah Chiu, Steven J Ludtke, Irina I Serysheva

Abstract read
In one paragraph

Article in Nature, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 134 papers.

0numbers the graph read from it
0cells of the map it votes in
134citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

134 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. The role of IPPflugers Archiv : European journal of physiology · 2026
    Review
  5. Article
  6. Conformational landscape and clustering of human type 2 IPbioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. From IP3RPEP6 Inhibition of IPCellular and molecular life sciences : CMLS · 2025
    Review
  12. Review
  13. The TRPV3 channel is a mediator of zinc influx and homeostasis in murine oocytes.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. Review
  15. Article
  16. Article
  17. ZneLife · 2023
    Article
  18. Review
  19. ZnbioRxiv : the preprint server for biology · 2023
    Article
  20. Structural titration reveals CaNature communications · 2023
    Article

74 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Guizhen FanDepartment of Biochemistry and Molecular Biology, Structural Biology Imaging Center, The University of Texas Medical School at Houston, 6431 Fannin Street, Houston, Texas 77030, USA.
Matthew L BakerNational Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, Texas 77030, USA.
Zhao WangNational Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, Texas 77030, USA.
Mariah R BakerDepartment of Biochemistry and Molecular Biology, Structural Biology Imaging Center, The University of Texas Medical School at Houston, 6431 Fannin Street, Houston, Texas 77030, USA.
Pavel A SinyagovskiyDepartment of Biochemistry and Molecular Biology, Structural Biology Imaging Center, The University of Texas Medical School at Houston, 6431 Fannin Street, Houston, Texas 77030, USA.
Wah ChiuNational Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, Texas 77030, USA.
Steven J LudtkeNational Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, Texas 77030, USA.
Irina I SeryshevaDepartment of Biochemistry and Molecular Biology, Structural Biology Imaging Center, The University of Texas Medical School at Houston, 6431 Fannin Street, Houston, Texas 77030, USA.

Funding

3 D ELECTRON MICROSCOPY OF MACROMOLECULES (5P41RR002250-27)P41GM103832 · NIGMS · STANFORD UNIVERSITY · PI CHIU, WAH · 2012 to 2019
$15.1M
Unified Data Resource for Large Complexes Determined by Cryo-Electron MicroscopyR01GM079429 · NIGMS · STANFORD UNIVERSITY · PI CHIU, WAH · 2007 to 2021
$11.6M
SUPPORT AND DEVELOPMENT OF EMAN FOR ELECTRON MICROSCOPY IMAGE PROCESSINGR01GM080139 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI LUDTKE, STEVEN J · 2006 to 2022
$5.4M
Structure-Function Studies Of IP3R ChannelsR01GM072804 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI SERYSHEVA, IRINA I · 2005 to 2023
$4.8M
Direct Detector for a 300kV Cryoelectron MicroscopeS10OD016279 · OD · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI WAXHAM, M. NEAL · 2013 to 2013
$599k
Atomic Resolution Cryo-EM using Model-Based ConstraintsR21GM100229 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI BAKER, MATTHEW LOWELL, LUDTKE, STEVEN J · 2013 to 2014
$430k
Structural Studies of RyR ChannelR21AR063255 · NIAMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI SERYSHEVA, IRINA I · 2013 to 2014
$368k
NIAMS NIH HHS R21 AR063255NIAMS NIH HHS R21AR063255NIGMS NIH HHS P41 GM103832NIGMS NIH HHS P41GM103832NIGMS NIH HHS R01 GM072804NIGMS NIH HHS R01GM072804NIGMS NIH HHS R01 GM079429NIGMS NIH HHS R01GM079429NIGMS NIH HHS R01 GM080139NIGMS NIH HHS R01GM080139NIGMS NIH HHS R21 GM100229NIGMS NIH HHS R21GM100229NIH HHS S10 OD016279NIH HHS S10OD016279
6 · The paper itself

Abstract

Inositol-1,4,5-trisphosphate receptors (InsP3Rs) are ubiquitous ion channels responsible for cytosolic Ca(2+) signalling and essential for a broad array of cellular processes ranging from contraction to secretion, and from proliferation to cell death. Despite decades of research on InsP3Rs, a mechanistic understanding of their structure-function relationship is lacking. Here we present the first, to our knowledge, near-atomic (4.7 Å) resolution electron cryomicroscopy structure of the tetrameric mammalian type 1 InsP3R channel in its apo-state. At this resolution, we are able to trace unambiguously ∼85% of the protein backbone, allowing us to identify the structural elements involved in gating and modulation of this 1.3-megadalton channel. Although the central Ca(2+)-conduction pathway is similar to other ion channels, including the closely related ryanodine receptor, the cytosolic carboxy termini are uniquely arranged in a left-handed α-helical bundle, directly interacting with the amino-terminal domains of adjacent subunits. This configuration suggests a molecular mechanism for allosteric regulation of channel gating by intracellular signals.

Indexed as

Cryoelectron MicroscopyAllosteric RegulationAnimalsApoproteinsCalciumCalcium SignalingCytosolInositol 1,4,5-Trisphosphate ReceptorsIon Channel GatingModels, MolecularProtein FoldingProtein Structure, QuaternaryProtein Structure, SecondaryProtein Structure, TertiaryProtein SubunitsRatsApoproteinsCalciumInositol 1,4,5-Trisphosphate ReceptorsProtein SubunitsRyanodine Receptor Calcium Release Channel

Identifiers

PMID26458101
PMCPMC4804758

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.