Evidence map›Paper›PMID 26457016›Full record

ReviewWorld journal of gastroenterology2015

What exists beyond cagA and vacA? Helicobacter pylori genes in gastric diseases.

Débora Menezes da Costa, Eliane dos Santos Pereira, Silvia Helena Barem Rabenhorst

Open access · hybridAbstract readReview
In one paragraph

Review in World journal of gastroenterology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 49 citations in OpenAlex.

  1. Effect of treatment failure on the CagA EPIYA motif inWorld journal of gastroenterology · 2017
    Trial
  2. Article
  3. Review
  4. Article
  5. Review
  6. The Influence ofAntibiotics (Basel, Switzerland) · 2023
    Review
  7. Evaluation of polygenic risk score for risk prediction of gastric cancer.World journal of gastrointestinal oncology · 2023
    Review
  8. Article
  9. Helicobacter pylori: an up-to-date overview on the virulence and pathogenesis mechanisms.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Review
  10. Characteristics of different types ofFrontiers in microbiology · 2022
    Article
  11. Frontiers in microbiology · 2022
    Review
  12. Whole-Genome Sequencing and Comparative Genomics of ThreePathogens (Basel, Switzerland) · 2021
    Article
  13. Pathways of Gastric Carcinogenesis,International journal of molecular sciences · 2020
    Review
  14. Article
  15. Article
  16. Eudesmin attenuatesExperimental and therapeutic medicine · 2018
    Article
  17. Significance of dormant forms ofWorld journal of gastroenterology · 2017
    Review
  18. Tim-3 Up-regulation in Patients with Gastric Cancer and Peptic Ulcer DiseaseAsian Pacific journal of cancer prevention : APJCP · 2017
    Article
  19. Review
  20. Protein signature characterizingInfectious agents and cancer · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Débora Menezes da CostaDébora Menezes da Costa, Eliane dos Santos Pereira, Silvia Helena Barem Rabenhorst, Molecular Genetics Laboratory, Department of Pathology and Forensic Medicine, School of Medicine, Federal University of Ceará, Ceará 60430-270, Brazil.
Eliane dos Santos PereiraDébora Menezes da Costa, Eliane dos Santos Pereira, Silvia Helena Barem Rabenhorst, Molecular Genetics Laboratory, Department of Pathology and Forensic Medicine, School of Medicine, Federal University of Ceará, Ceará 60430-270, Brazil.
Silvia Helena Barem RabenhorstDébora Menezes da Costa, Eliane dos Santos Pereira, Silvia Helena Barem Rabenhorst, Molecular Genetics Laboratory, Department of Pathology and Forensic Medicine, School of Medicine, Federal University of Ceará, Ceará 60430-270, Brazil.
Universidade Federal do Ceará · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Helicobacter pylori (H. pylori) infection is present in more than half the world's population and has been associated with several gastric disorders, such as gastritis, peptic ulceration, and gastric adenocarcinoma. The clinical outcome of this infection depends on host and bacterial factors where H. pylori virulence genes seem to play a relevant role. Studies of cagA and vacA genes established that they were determining factors in gastric pathogenesis. However, there are gastric cancer cases that are cagA-negative. Several other virulence genes have been searched for, but these genes remain less well known that cagA and vacA. Thus, this review aimed to establish which genes have been suggested as potentially relevant virulence factors for H. pylori-associated gastrointestinal diseases. We focused on the cag-pathogenicity island, genes with adherence and motility functions, and iceA based on the relevance shown in several studies in the literature.

Indexed as

AnimalsAntigens, BacterialBacterial AdhesionBacterial Outer Membrane ProteinsBacterial ProteinsGastritisGenomic IslandsHelicobacter InfectionsHelicobacter pyloriHumansInflammationPeptic UlcerStomachStomach DiseasesStomach NeoplasmsVirulenceAntigens, BacterialBacterial Outer Membrane ProteinsBacterial ProteinscagA protein, Helicobacter pyloriPicB protein, Helicobacter pyloriVacA protein, Helicobacter pyloriVirulence FactorsAdhesion genesCag-pathogenicity islandHelicobacter pyloriMotility genesVirulence genes

Identifiers

PMID26457016
PMCPMC4588078
OpenAlexW2413252326

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.