Evidence map›Paper›PMID 26456860›Full record

ArticleScientific reports2015

Discovering neutralizing antibodies targeting the stem epitope of H1N1 influenza hemagglutinin with synthetic phage-displayed antibody libraries.

Chao-Ping Tung, Ing-Chien Chen, Chung-Ming Yu, Hung-Pin Peng, Jhih-Wei Jian, Shiou-Hwa Ma, Yu-Ching Lee, Jia-Tsrong Jan, An-Suei Yang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Chao-Ping TungGenomics Research Center, Academia Sinica, Taipei, Taiwan 115.
Ing-Chien ChenGenomics Research Center, Academia Sinica, Taipei, Taiwan 115.
Chung-Ming YuGenomics Research Center, Academia Sinica, Taipei, Taiwan 115.
Hung-Pin PengGenomics Research Center, Academia Sinica, Taipei, Taiwan 115.
Jhih-Wei JianGenomics Research Center, Academia Sinica, Taipei, Taiwan 115.
Shiou-Hwa MaGenomics Research Center, Academia Sinica, Taipei, Taiwan 115.
Yu-Ching LeeGenomics Research Center, Academia Sinica, Taipei, Taiwan 115.
Jia-Tsrong JanGenomics Research Center, Academia Sinica, Taipei, Taiwan 115.
An-Suei YangGenomics Research Center, Academia Sinica, Taipei, Taiwan 115.
Genomics Research Center, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Broadly neutralizing antibodies developed from the IGHV1-69 germline gene are known to bind to the stem region of hemagglutinin in diverse influenza viruses but the sequence determinants for the antigen recognition, including neutralization potency and binding affinity, are not clearly understood. Such understanding could inform designs of synthetic antibody libraries targeting the stem epitope on hemagglutinin, leading to artificially designed antibodies that are functionally advantageous over antibodies from natural antibody repertoires. In this work, the sequence space of the complementarity determining regions of a broadly neutralizing antibody (F10) targeting the stem epitope on the hemagglutinin of a strain of H1N1 influenza virus was systematically explored; the elucidated antibody-hemagglutinin recognition principles were used to design a phage-displayed antibody library, which was then used to discover neutralizing antibodies against another strain of H1N1 virus. More than 1000 functional antibody candidates were selected from the antibody library and were shown to neutralize the corresponding strain of influenza virus with up to 7 folds higher potency comparing with the parent F10 antibody. The antibody library could be used to discover functionally effective antibodies against other H1N1 influenza viruses, supporting the notion that target-specific antibody libraries can be designed and constructed with systematic sequence-function information.

Indexed as

Peptide LibraryAmino Acid SequenceAnimalsAntibodies, NeutralizingAntibodies, ViralCross ReactionsDogsEpitope MappingEpitopesHemagglutinin Glycoproteins, Influenza VirusHumansInfluenza A Virus, H1N1 SubtypeMadin Darby Canine Kidney CellsMolecular Sequence DataNeutralization TestsProtein BindingAntibodies, NeutralizingAntibodies, ViralEpitopesHemagglutinin Glycoproteins, Influenza VirusPeptide LibrarySingle-Chain Antibodies

Identifiers

PMID26456860
PMCPMC4601012
OpenAlexW2396813794

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.