Evidence map›Paper›PMID 26453996›Full record

ArticleDNA repair2015

Physical interaction between SLX4 (FANCP) and XPF (FANCQ) proteins and biological consequences of interaction-defective missense mutations.

Keiji Hashimoto, Kunio Wada, Kyomu Matsumoto, Masaaki Moriya

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Computed cancer interactome explains the effects of somatic mutations in cancers.Protein science : a publication of the Protein Society · 2022
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Keiji HashimotoLaboratory of Chemical Biology, Department of Pharmacological Sciences, State University of New York, Stony Brook, NY 11794, USA.
Kunio WadaDivision of Toxicology, Institute of Environmental Toxicology, Ibaraki 303-0043, Japan.
Kyomu MatsumotoDivision of Toxicology, Institute of Environmental Toxicology, Ibaraki 303-0043, Japan.
Masaaki MoriyaLaboratory of Chemical Biology, Department of Pharmacological Sciences, State University of New York, Stony Brook, NY 11794, USA. Electronic address: masaaki.moriya@stonybrook.edu.
Stony Brook University · US

Funding

Mechanism of Mammalian Translesion DNA synthesisR01ES018833 · NIEHS · STATE UNIVERSITY NEW YORK STONY BROOK · PI MORIYA, MASAAKI · 2010 to 2014
$1.4M
NIEHS NIH HHS R01 ES018833
6 · The paper itself

Abstract

SLX4 (FANCP) and XPF (FANCQ) proteins interact with each other and play a vital role in the Fanconi anemia (FA) DNA repair pathway. We have identified a SLX4 region and several amino acid residues that are responsible for this interaction. The study has revealed that the global minor allele, SLX4(Y546C), is defective in this interaction and cannot complement Fancp knockout mouse cells in mitomycin C-induced cytotoxicity or chromosomal aberrations. These results highly suggest this allele, as well as SLX4(L530Q), to be pathogenic. The interacting partner XPF is involved in various DNA repair pathways, and certain XPF mutations cause progeria, Cockayne syndrome (CS), and/or FA phenotypes. Because several atypical xeroderma pigmentosum (XP) phenotype-causing XPF missense mutations are located in the SLX4-interacting region, we suspected the disruption of the interaction with SLX4 in these XPF mutants, thereby causing severer phenotypes. The immunoprecipitation assay of cell extracts revealed that those XPF mutations, except XPF(C236R), located in the SLX4-interacting region cause instability of XPF protein, which could be the reason for the FA, progeria and/or CS phenotypes.

Indexed as

Mutation, MissenseAmino Acid SequenceAnimalsChromosome AberrationsCockayne SyndromeDNA-Binding ProteinsDNA RepairFanconi AnemiaGenetic Complementation TestHEK293 CellsHumansMiceMice, KnockoutMitomycinMolecular Sequence DataProgeriaDNA-Binding ProteinsMitomycinRecombinasesSLX4 protein, humanxeroderma pigmentosum group F proteinFanconi anemiaFANCPInterstrand crosslink repairProtein–protein interactionSLX4XPF

Identifiers

PMID26453996
PMCPMC4651760
OpenAlexW1867215437

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.