Evidence map›Paper›PMID 26453745›Full record

ArticleJournal of experimental botany2016

Overexpression of OsCYP19-4 increases tolerance to cold stress and enhances grain yield in rice (Oryza sativa).

Dae Hwa Yoon, Sang Sook Lee, Hyun Ji Park, Jae Il Lyu, Won Seog Chong, Jang Ryol Liu, Beom-Gi Kim, Jun Cheul Ahn, Hye Sun Cho

Abstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
  2. TheGenes · 2025
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  3. Comparative genomics and expression analysis of theFrontiers in plant science · 2025
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  4. Genome-wide identification and expression analyses ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2024
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  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Genomics and transcriptomics to protect rice (Frontiers in plant science · 2022
    Review
  15. The CyclophilinFrontiers in plant science · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Dae Hwa YoonSustainable Bioresource Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon 305-806, Korea Department of Pharmacology, College of Medicine, Seonam University, Namwon 590-170, Korea.
Sang Sook LeeSustainable Bioresource Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon 305-806, Korea.
Hyun Ji ParkSustainable Bioresource Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon 305-806, Korea.
Jae Il LyuDepartment of New Biology, Daegu Gyeongbuk Institute of Science & Technology, Daegu 711-873, Korea.
Won Seog ChongDepartment of Pharmacology, College of Medicine, Seonam University, Namwon 590-170, Korea.
Jang Ryol LiuDepartment of New Biology, Daegu Gyeongbuk Institute of Science & Technology, Daegu 711-873, Korea.
Beom-Gi KimMolecular Breeding Division, National Academy of Agricultural Science, RDA, Jeonju 560-500, Korea hscho@kribb.re.kr secmeta2@yahoo.com bgkimpeace@korea.kr.
Jun Cheul AhnDepartment of Pharmacology, College of Medicine, Seonam University, Namwon 590-170, Korea hscho@kribb.re.kr secmeta2@yahoo.com bgkimpeace@korea.kr.
Hye Sun ChoSustainable Bioresource Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon 305-806, Korea hscho@kribb.re.kr secmeta2@yahoo.com bgkimpeace@korea.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

AtCYP19-4 (also known as CYP5) was previously identified as interacting in vitro with GNOM, a member of a large family of ARF guanine nucleotide exchange factors that is required for proper polar localization of the auxin efflux carrier PIN1. The present study demonstrated that OsCYP19-4, a gene encoding a putative homologue of AtCYP19-4, was up-regulated by several stresses and showed over 10-fold up-regulation in response to cold. The study further demonstrated that the promoter of OsCYP19-4 was activated in response to cold stress. An OsCYP19-4-GFP fusion protein was targeted to the outside of the plasma membrane via the endoplasmic reticulum as determined using brefeldin A, a vesicle trafficking inhibitor. An in vitro assay with a synthetic substrate oligomer confirmed that OsCYP19-4 had peptidyl-prolyl cis-trans isomerase activity, as was previously reported for AtCYP19-4. Rice plants overexpressing OsCYP19-4 showed cold-resistance phenotypes with significantly increased tiller and spike numbers, and consequently enhanced grain weight, compared with wild-type plants. Based on these results, the authors suggest that OsCYP19-4 is required for developmental acclimation to environmental stresses, especially cold. Furthermore, the results point to the potential of manipulating OsCYP19-4 expression to enhance cold tolerance or to increase biomass.

Indexed as

Cold TemperatureGene Expression Regulation, PlantArabidopsisEdible GrainOryzaPlant ProteinsPlants, Genetically ModifiedStress, PhysiologicalPlant ProteinsApoplastcold stress toleranceCYP19-4immunophilinincreased tilleringOryza sativa L.

Identifiers

PMID26453745
PMCPMC4682425

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.