Evidence map›Paper›PMID 26453572›Full record

ReviewChromosoma2016

The quest for mammalian Polycomb response elements: are we there yet?

Moritz Bauer, Johanna Trupke, Leonie Ringrose

Open access · hybridAbstract readReview
In one paragraph

Review in Chromosoma, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 108 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Functional analyses of the polycomb-group genes in sea lamprey embryos undergoing programmed DNA loss.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2024
    Article
  6. Article
  7. Polycomb Recruiters Inside and Outside of the Repressed Domains.International journal of molecular sciences · 2023
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Moritz BauerInstitute of Molecular Biotechnology (IMBA), Dr. Bohr-Gasse 3, 1030, Vienna, Austria.
Johanna TrupkeInstitute of Molecular Biotechnology (IMBA), Dr. Bohr-Gasse 3, 1030, Vienna, Austria.
Leonie RingroseInstitute of Molecular Biotechnology (IMBA), Dr. Bohr-Gasse 3, 1030, Vienna, Austria. leonie.ringrose@iri-lifesciences.de.
Institute of Molecular Biotechnology · ATHumboldt-Universität zu Berlin · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A long-standing mystery in the field of Polycomb and Trithorax regulation is how these proteins, which are highly conserved between flies and mammals, can regulate several hundred equally highly conserved target genes, but recognise these targets via cis-regulatory elements that appear to show no conservation in their DNA sequence. These elements, termed Polycomb/Trithorax response elements (PRE/TREs or PREs), are relatively well characterised in flies, but their mammalian counterparts have proved to be extremely difficult to identify. Recent progress in this endeavour has generated a wealth of data and raised several intriguing questions. Here, we ask why and to what extent mammalian PREs are so different to those of the fly. We review recent advances, evaluate current models and identify open questions in the quest for mammalian PREs.

Indexed as

AnimalsChromosomal Proteins, Non-HistoneCpG IslandsDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsGenes, HomeoboxHistonesHumansMicePolycomb-Group ProteinsPolycomb Repressive Complex 1Polycomb Repressive Complex 2Protein Processing, Post-TranslationalResponse ElementsTranscription FactorsChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDrosophila ProteinsHistonesPolycomb-Group ProteinsPolycomb Repressive Complex 1Polycomb Repressive Complex 2Transcription Factorstrx protein, DrosophilaDrosophilaEpigeneticsMammalPolycombPolycomb response elementTrithorax

Identifiers

PMID26453572
PMCPMC4901126
OpenAlexW1931010989

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.