Evidence map›Paper›PMID 26452552›Full record

ArticleApplied and environmental microbiology2016

The Antisense RNA Approach: a New Application for In Vivo Investigation of the Stress Response of Oenococcus oeni, a Wine-Associated Lactic Acid Bacterium.

Maud Darsonval, Tarek Msadek, Hervé Alexandre, Cosette Grandvalet

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Comparative genomic analysis of 255Microbiology spectrum · 2025
    Article
  3. Gene manipulation inFrontiers in microbiology · 2025
    Article
  4. Article
  5. Genomic Analysis of an Excellent Wine-Making StrainPolish journal of microbiology · 2022
    Article
  6. Analysis of Transcriptomic Response to SOMicrobiology spectrum · 2021
    Article
  7. Article
  8. Article
  9. The Phenotypic Analysis ofFrontiers in microbiology · 2019
    Article
  10. CtsR, the Master Regulator of Stress-Response inFrontiers in microbiology · 2018
    Article
  11. Transcriptomic Analysis ofFrontiers in microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Maud DarsonvalUMR Procédés Alimentaires et Microbiologiques, Equipe Vin, Aliment, Microbiologie, Stress, AgroSup Dijon-Université de Bourgogne, Institut Universitaire de la Vigne et du Vin, Dijon, France.
Tarek MsadekUnité de Biologie des Bactéries Pathogènes à Gram Positif, Institut Pasteur, Paris, France CNRS ERL 3526, Paris, France.
Hervé AlexandreUMR Procédés Alimentaires et Microbiologiques, Equipe Vin, Aliment, Microbiologie, Stress, AgroSup Dijon-Université de Bourgogne, Institut Universitaire de la Vigne et du Vin, Dijon, France.
Cosette GrandvaletUMR Procédés Alimentaires et Microbiologiques, Equipe Vin, Aliment, Microbiologie, Stress, AgroSup Dijon-Université de Bourgogne, Institut Universitaire de la Vigne et du Vin, Dijon, France AgroSup Dijon, Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement, Dijon, France cosette.grandvalet@u-bourgogne.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oenococcus oeni is a wine-associated lactic acid bacterium mostly responsible for malolactic fermentation in wine. In wine, O. oeni grows in an environment hostile to bacterial growth (low pH, low temperature, and ethanol) that induces stress response mechanisms. To survive, O. oeni is known to set up transitional stress response mechanisms through the synthesis of heat stress proteins (HSPs) encoded by the hsp genes, notably a unique small HSP named Lo18. Despite the availability of the genome sequence, characterization of O. oeni genes is limited, and little is known about the in vivo role of Lo18. Due to the lack of genetic tools for O. oeni, an efficient expression vector in O. oeni is still lacking, and deletion or inactivation of the hsp18 gene is not presently practicable. As an alternative approach, with the goal of understanding the biological function of the O. oeni hsp18 gene in vivo, we have developed an expression vector to produce antisense RNA targeting of hsp18 mRNA. Recombinant strains were exposed to multiple stresses inducing hsp18 gene expression: heat shock and acid shock. We showed that antisense attenuation of hsp18 affects O. oeni survival under stress conditions. These results confirm the involvement of Lo18 in heat and acid tolerance of O. oeni. Results of anisotropy experiments also confirm a membrane-protective role for Lo18, as previous observations had already suggested. This study describes a new, efficient tool to demonstrate the use of antisense technology for modulating gene expression in O. oeni.

Indexed as

Bacterial ProteinsEthanolFermentationGene Expression Regulation, BacterialHeat-Shock ProteinsLactic AcidOenococcusRNA, AntisenseWineBacterial ProteinsEthanolHeat-Shock ProteinsLactic AcidRNA, Antisense

Identifiers

PMID26452552
PMCPMC4702648

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.