Evidence map›Paper›PMID 26452388›Full record

ArticleInternational journal of epidemiology2016

ViPAR: a software platform for the Virtual Pooling and Analysis of Research Data.

Kim W Carter, Richard W Francis, K W Carter, R W Francis, M Bresnahan, M Gissler, T K Grønborg, R Gross, N Gunnes, G Hammond and 21 more

Open access · hybridAbstract read
In one paragraph

Article in International journal of epidemiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
19.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 53 citations in OpenAlex.

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  2. Methodological challenges and opportunities when studying the course of autism.Autism : the international journal of research and practice · 2025
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  4. Big data in autism research: Methodological challenges and solutions.Autism research : official journal of the International Society for Autism Research · 2023
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  6. A deterministic approach for protecting privacy in sensitive personal data.BMC medical informatics and decision making · 2022
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  7. Review
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  12. A Correlated Noise-assisted Decentralized Differentially Private Estimation Protocol, and its application to fMRI Source Separation.IEEE transactions on signal processing : a publication of the IEEE Signal Processing Society · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Recurrence Risk of Autism in Siblings and Cousins: A Multinational, Population-Based Study.Journal of the American Academy of Child and Adolescent Psychiatry · 2019
    Article
  18. Article
  19. Article
  20. Opportunities and obstacles for deep learning in biology and medicine.Journal of the Royal Society, Interface · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors at 12 institutions in 8 countries.

Kim W Carter
Richard W Francis
K W CarterTelethon Kids Institute, University of Western Australia, Perth, WA, Australia.
R W FrancisTelethon Kids Institute, University of Western Australia, Perth, WA, Australia.
M BresnahanDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY, USA, New York State Psychiatric Institute, New York, NY, USA.
M GisslerNational Institute for Health and Welfare, Helsinki, Finland, NHV Nordic School of Public Health, Gothenburg, Sweden.
T K GrønborgDepartment of Public Health, University of Aarhus, Aarhus, Denmark.
R GrossDivision of Psychiatry, Sheba Medical Center, Tel Hashomer, Israel, Department of Epidemiology and Preventive Medicine, Sackler Faculty of Medicine, Tel Aviv University, Ramat Aviv, Israel.
N GunnesNorwegian Institute of Public Health, Oslo, Norway.
G HammondTelethon Kids Institute, University of Western Australia, Perth, WA, Australia.
M HornigDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY, USA, Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.
C M HultmanKarolinska Institutet, Stockholm, Sweden.
J HuttunenTurku University, Turku, Finland.
A LangridgeTelethon Kids Institute, University of Western Australia, Perth, WA, Australia.
H LeonardTelethon Kids Institute, University of Western Australia, Perth, WA, Australia.
S NewmanInstitute of Psychiatry, King's College London, London, UK.
E T ParnerDepartment of Public Health, University of Aarhus, Aarhus, Denmark.
G PeterssonKarolinska Institutet, Stockholm, Sweden.
A ReichenbergDepartment of Psychosis Studies, Institute of Psychiatry, King's College London, London, UK, Departments of Preventative Medicine and Psychiatry, Ischan School of Medicine at Mount Sinai, New York, NY, USA.
S SandinKarolinska Institutet, Stockholm, Sweden.
D E SchendelDepartment of Public Health, Section for Epidemiology, University of Aarhus, Aarhus, Denmark, Department of Economics and Business, National Centre for Register-based Research, University of Aarhus, Aarhus, Denmark, Lundbeck Foundation Initiative for Integrative Psychiatric Research, iPSYCH, Copenhagen, Denmark.
L SchalkwykInstitute of Psychiatry, King's College London, London, UK.
A SouranderChild Psychiatry Research Center, Department of Child Psychiatry, Turku University, Turku, Finland, Turku University Hospital, Turku, Finland.
C SteadmanTelethon Kids Institute, University of Western Australia, Perth, WA, Australia.
C StoltenbergNorwegian Institute of Public Health, Oslo, Norway, Department of Global Public Health and Primary Care, University of Bergen, Bergen, Norway.
A SuominenDepartment of Child Psychiatry, Turku University, Turku, Finland and.
P SurénNorwegian Institute of Public Health, Oslo, Norway.
E SusserDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY, USA, New York State Psychiatric Institute, New York, NY, USA.
A Sylvester VethanayagamUniversity of Aarhus, Aarhus, Denmark.
Z YusofKarolinska Institutet, Stockholm, Sweden.
International Collaboration for Autism Registry Epidemiology
University of Western Australia · AUKarolinska Institutet · SEAarhus University · DKColumbia University · USKing's College London · GBUniversity of Turku · FINorwegian Institute of Public Health · NOThe Kids Research Institute Australia · AULundbeck Foundation · DKNordic School of Public Health · SETel Aviv University · ILUniversity of Bergen · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundResearch studies exploring the determinants of disease require sufficient statistical power to detect meaningful effects. Sample size is often increased through centralized pooling of disparately located datasets, though ethical, privacy and data ownership issues can often hamper this process. Methods that facilitate the sharing of research data that are sympathetic with these issues and which allow flexible and detailed statistical analyses are therefore in critical need. We have created a software platform for the Virtual Pooling and Analysis of Research data (ViPAR), which employs free and open source methods to provide researchers with a web-based platform to analyse datasets housed in disparate locations.

methodsDatabase federation permits controlled access to remotely located datasets from a central location. The Secure Shell protocol allows data to be securely exchanged between devices over an insecure network. ViPAR combines these free technologies into a solution that facilitates 'virtual pooling' where data can be temporarily pooled into computer memory and made available for analysis without the need for permanent central storage.

resultsWithin the ViPAR infrastructure, remote sites manage their own harmonized research dataset in a database hosted at their site, while a central server hosts the data federation component and a secure analysis portal. When an analysis is initiated, requested data are retrieved from each remote site and virtually pooled at the central site. The data are then analysed by statistical software and, on completion, results of the analysis are returned to the user and the virtually pooled data are removed from memory.

conclusionsViPAR is a secure, flexible and powerful analysis platform built on open source technology that is currently in use by large international consortia, and is made publicly available at [http://bioinformatics.childhealthresearch.org.au/software/vipar/].

Indexed as

data federationdata poolingdata sharingViPAR

Identifiers

PMID26452388
PMCPMC4864874
OpenAlexW2243210237

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.