Evidence map›Paper›PMID 26452218›Full record

ArticleOncotarget2015

A radiosensitivity MiRNA signature validated by the TCGA database for head and neck squamous cell carcinomas.

Ning Liu, Rebecca J Boohaker, Chunling Jiang, James R Boohaker, Bo Xu

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
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  12. miR-134: A Human Cancer Suppressor?Molecular therapy. Nucleic acids · 2017
    Review
  13. Article
  14. Review
  15. Article
  16. The complexity of microRNAs in human cancer.Journal of radiation research · 2016
    Review
  17. Article
  18. Article
  19. Genomic insights into head and neck cancer.Cancers of the head & neck · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Ning LiuDepartment of Oncology, Southern Research Institute, Birmingham, AL 35205, USA.
Rebecca J BoohakerDepartment of Oncology, Southern Research Institute, Birmingham, AL 35205, USA.
Chunling JiangNanchang University Graduate School, Nanchang 330047, China.
James R BoohakerDepartment of Economics, American University, Washington, DC 20016, USA.
Bo XuDepartment of Oncology, Southern Research Institute, Birmingham, AL 35205, USA.
Southern Research Institute · USAmerican University · USNanchang University · CNUniversity of Alabama at Birmingham · US

Funding

Mechanisms of Mitotic Activation of the ATM kinaseR01CA133093 · NCI · SOUTHERN RESEARCH INSTITUTE · PI XU, BO · 2009 to 2013
$1.4M
NCI NIH HHS R01 CA133093NCI NIH HHS R01CA133093
6 · The paper itself

Abstract

MicroRNA, a class of small non-coding RNAs, play critical roles in the cellular response to DNA damage induced by ionizing irradiation (IR). Growing evidence shows alteration of miRNAs, in response to radiation, controls cellular radiosensitivity in DNA damage response pathways. However, it is less clear about the clinical relevance of miRNA regulation in radiosensitivity. Using an in vitro system, we conducted microarray to identify a miRNA signature to assess radiosensitivity. The data were validated by analyzing available Head and Neck Squamous Cell Carcinoma (HNSCC) samples in the cancer genome atlas (TCGA) database. A total of 27 miRNAs showed differential alteration in response to IR in an Ataxia-Telangiectasia Mutated (ATM) kinase-dependent manner. We validated the list and identified a five miRNA signature that can predict radiation responsiveness in HNSCC. Furthermore, we found that the expression level of ATM in these patients was correlated with the radiation responsiveness. Together, we demonstrate the feasibility of using a miRNA signature to predict the clinical responsiveness of HNSCC radiotherapy.

Indexed as

Ataxia Telangiectasia Mutated ProteinsCarcinoma, Squamous CellCell Line, TumorDatabases, GeneticHead and Neck NeoplasmsHumansMicroRNAsOligonucleotide Array Sequence AnalysisRadiation ToleranceSquamous Cell Carcinoma of Head and NeckTranscriptomeAtaxia Telangiectasia Mutated ProteinsATM protein, humanMicroRNAsATMmiRNAradiosensitivity

Identifiers

PMID26452218
PMCPMC4741479
OpenAlexW2212349581

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.