Evidence map›Paper›PMID 26450557›Full record

ArticleScientific reports2015

Structure of the DBL3X-DBL4ε region of the VAR2CSA placental malaria vaccine candidate: insight into DBL domain interactions.

Stéphane Gangnard, Anita Lewit-Bentley, Sébastien Dechavanne, Anand Srivastava, Faroudja Amirat, Graham A Bentley, Benoît Gamain

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. VAR2CSA-Mediated Host Defense Evasion ofFrontiers in immunology · 2020
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Novel Strategies for Malaria Vaccine Design.Frontiers in immunology · 2018
    Review
  14. Malaria Parasites: The Great Escape.Frontiers in immunology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Stéphane GangnardInserm UMR_1134, Paris, France.
Anita Lewit-BentleyUnité d'Immunologie Structurale, Département de Biologie Structurale et Chimie, Institut Pasteur, 25 rue du Docteur Roux, 75724 Paris, France.
Sébastien DechavanneInserm UMR_1134, Paris, France.
Anand SrivastavaInserm UMR_1134, Paris, France.
Faroudja AmiratUnité d'Immunologie Structurale, Département de Biologie Structurale et Chimie, Institut Pasteur, 25 rue du Docteur Roux, 75724 Paris, France.
Graham A BentleyUnité d'Immunologie Structurale, Département de Biologie Structurale et Chimie, Institut Pasteur, 25 rue du Docteur Roux, 75724 Paris, France.
Benoît GamainInserm UMR_1134, Paris, France.
Centre National de la Recherche Scientifique · FRInserm · FRInstitut Pasteur · FRInstitut National de la Transfusion Sanguine · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The human malaria parasite, Plasmodium falciparum, is able to evade spleen-mediated clearing from blood stream by sequestering in peripheral organs. This is due to the adhesive properties conferred by the P. falciparum Erythrocyte Membrane Protein 1 (PfEMP1) family exported by the parasite to the surface of infected erythrocytes. Expression of the VAR2CSA variant of PfEMP1 leads to pregnancy-associated malaria, which occurs when infected erythrocytes massively sequester in the placenta by binding to low-sulfated Chondroitin Sulfate A (CSA) present in the intervillous spaces. VAR2CSA is a 350 kDa protein that carries six Duffy-Binding Like (DBL) domains, one Cysteine-rich Inter-Domain Regions (CIDR) and several inter-domain regions. In the present paper, we report for the first time the crystal structure at 2.9 Å of a VAR2CSA double domain, DBL3X-DBL4ε, from the FCR3 strain. DBL3X and DBL4ε share a large contact interface formed by residues that are invariant or highly conserved in VAR2CSA variants, which suggests that these two central DBL domains (DBL3X-DBL4ε) contribute significantly to the structuring of the functional VAR2CSA extracellular region. We have also examined the antigenicity of peptides corresponding to exposed loop regions of the DBL4ε structure.

Indexed as

Amino Acid SequenceAnimalsAntibodies, ProtozoanAntigens, ProtozoanBinding SitesChondroitin SulfatesCrystallography, X-RayErythrocytesFemaleHost-Parasite InteractionsHumansImmune SeraMalaria, FalciparumMalaria VaccinesModels, MolecularMolecular Sequence DataAntibodies, ProtozoanAntigens, ProtozoanChondroitin SulfatesImmune SeraMalaria VaccinesVAR2CSA protein, Plasmodium falciparum

Identifiers

PMID26450557
PMCPMC4598876
OpenAlexW2411279549

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.