Evidence map›Paper›PMID 26449768›Full record

ArticleMicrobial cell factories2015

Enhanced production of a single domain antibody with an engineered stabilizing extra disulfide bond.

Jinny L Liu, Ellen R Goldman, Dan Zabetakis, Scott A Walper, Kendrick B Turner, Lisa C Shriver-Lake, George P Anderson

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  3. NbThermo: a new thermostability database for nanobodies.Database : the journal of biological databases and curation · 2023
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  11. Toward Drug-Like Multispecific Antibodies by Design.International journal of molecular sciences · 2020
    Review
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  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jinny L LiuNaval Research Laboratory, Center for Bio/Molecular Science and Engineering, Washington, DC, 20375, USA. jinny.liu@nrl.navy.mil.
Ellen R GoldmanNaval Research Laboratory, Center for Bio/Molecular Science and Engineering, Washington, DC, 20375, USA. ellen.goldman@nrl.navy.mil.
Dan ZabetakisNaval Research Laboratory, Center for Bio/Molecular Science and Engineering, Washington, DC, 20375, USA. daniel.zabetakis@nrl.navy.mil.
Scott A WalperNaval Research Laboratory, Center for Bio/Molecular Science and Engineering, Washington, DC, 20375, USA. scott.walper@nrl.navy.mil.
Kendrick B TurnerNaval Research Laboratory, Center for Bio/Molecular Science and Engineering, Washington, DC, 20375, USA. kendrick.turner@nrl.navy.mil.
Lisa C Shriver-LakeNaval Research Laboratory, Center for Bio/Molecular Science and Engineering, Washington, DC, 20375, USA. lisa.shriver-lake@nrl.navy.mil.
George P AndersonNaval Research Laboratory, Center for Bio/Molecular Science and Engineering, Washington, DC, 20375, USA. george.anderson@nrl.navy.mil.
Naval Research Laboratory Center for Bio/Molecular Science and EngineeringUnited States Naval Research Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSingle domain antibodies derived from the variable region of the unique heavy chain antibodies found in camelids yield high affinity and regenerable recognition elements. Adding an additional disulfide bond that bridges framework regions is a proven method to increase their melting temperature, however often at the expense of protein production. To fulfill their full potential it is essential to achieve robust protein production of these stable binding elements. In this work, we tested the hypothesis that decreasing the isoelectric point of single domain antibody extra disulfide bond mutants whose production fell due to the incorporation of the extra disulfide bond would lead to recovery of the protein yield, while maintaining the favorable melting temperature and affinity.

resultsIntroduction of negative charges into a disulfide bond mutant of a single domain antibody specific for the L1 antigen of the vaccinia virus led to approximately 3.5-fold increase of protein production to 14 mg/L, while affinity and melting temperature was maintained. In addition, refolding following heat denaturation improved from 15 to 70 %. It also maintained nearly 100 % of its binding function after heating to 85 °C for an hour at 1 mg/mL. Disappointingly, the replacement of neutral or positively charged amino acids with negatively charged ones to lower the isoelectric point of two anti-toxin single domain antibodies stabilized with a second disulfide bond yielded only slight increases in protein production. Nonetheless, for one of these binders the charge change itself stabilized the structure equivalent to disulfide bond addition, thus providing an alternative route to stabilization which is not accompanied by loss in production.

conclusionThe ability to produce high affinity, stable single domain antibodies is critical for their utility. While the addition of a second disulfide bond is a proven method for enhancing stability of single domain antibodies, it frequently comes at the cost of reduced yields. While decreasing the isoelectric point of double disulfide mutants of single domain antibodies may improve protein production, charge addition appears to consistently improve refolding and some charge changes can also improve thermal stability, thus providing a number of benefits making the examination of such mutations worth consideration.

Indexed as

Amino Acid SequenceAntigen-Antibody ReactionsCircular DichroismDisulfidesIsoelectric PointKineticsLeukocyte L1 Antigen ComplexMolecular Sequence DataProtein RefoldingProtein StabilitySingle-Domain AntibodiesSurface Plasmon ResonanceTransition TemperatureVaccinia virusViral ProteinsDisulfidesLeukocyte L1 Antigen ComplexSingle-Domain AntibodiesViral Proteins

Identifiers

PMID26449768
PMCPMC4599338
OpenAlexW1936199022

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.