Evidence map›Paper›PMID 26447861›Full record

ArticlePloS one2015

Enhanced Performance of Brain Tumor Classification via Tumor Region Augmentation and Partition.

Jun Cheng, Wei Huang, Shuangliang Cao, Ru Yang, Wei Yang, Zhaoqiang Yun, Zhijian Wang, Qianjin Feng

Erratum issuedAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 143 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
143citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

143 citing papers in PubMed, 3 syntheses or guidelines pooled it.

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83 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Jun ChengSchool of Biomedical Engineering, Southern Medical University, Guangzhou, China.
Wei HuangSchool of Biomedical Engineering, Southern Medical University, Guangzhou, China.
Shuangliang CaoSchool of Biomedical Engineering, Southern Medical University, Guangzhou, China.
Ru YangSchool of Biomedical Engineering, Southern Medical University, Guangzhou, China.
Wei YangSchool of Biomedical Engineering, Southern Medical University, Guangzhou, China.
Zhaoqiang YunSchool of Biomedical Engineering, Southern Medical University, Guangzhou, China.
Zhijian WangDepartment of Obstetrics and Gynecology, Nanfang Hospital of Southern Medical University, Guangzhou, China.
Qianjin FengSchool of Biomedical Engineering, Southern Medical University, Guangzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Automatic classification of tissue types of region of interest (ROI) plays an important role in computer-aided diagnosis. In the current study, we focus on the classification of three types of brain tumors (i.e., meningioma, glioma, and pituitary tumor) in T1-weighted contrast-enhanced MRI (CE-MRI) images. Spatial pyramid matching (SPM), which splits the image into increasingly fine rectangular subregions and computes histograms of local features from each subregion, exhibits excellent results for natural scene classification. However, this approach is not applicable for brain tumors, because of the great variations in tumor shape and size. In this paper, we propose a method to enhance the classification performance. First, the augmented tumor region via image dilation is used as the ROI instead of the original tumor region because tumor surrounding tissues can also offer important clues for tumor types. Second, the augmented tumor region is split into increasingly fine ring-form subregions. We evaluate the efficacy of the proposed method on a large dataset with three feature extraction methods, namely, intensity histogram, gray level co-occurrence matrix (GLCM), and bag-of-words (BoW) model. Compared with using tumor region as ROI, using augmented tumor region as ROI improves the accuracies to 82.31% from 71.39%, 84.75% from 78.18%, and 88.19% from 83.54% for intensity histogram, GLCM, and BoW model, respectively. In addition to region augmentation, ring-form partition can further improve the accuracies up to 87.54%, 89.72%, and 91.28%. These experimental results demonstrate that the proposed method is feasible and effective for the classification of brain tumors in T1-weighted CE-MRI.

Indexed as

Brain NeoplasmsGliomaHumansImage Interpretation, Computer-AssistedMagnetic Resonance ImagingMeningiomaSensitivity and Specificity

Identifiers

PMID26447861
PMCPMC4598126

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.