Evidence map›Paper›PMID 26447184›Full record

ArticleRNA (New York, N.Y.)2015

Integrity of the core mitochondrial RNA-binding complex 1 is vital for trypanosome RNA editing.

Zhenqiu Huang, Drahomíra Faktorová, Adéla Křížová, Lucie Kafková, Laurie K Read, Julius Lukeš, Hassan Hashimi

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 4 countries.

Zhenqiu HuangBiology Center, Institute of Parasitology, Czech Academy of Sciences, České Budějovice (Budweis), 370 05, Czech Republic Faculty of Sciences, University of South Bohemia, České Budějovice (Budweis), 370 05, Czech Republic.
Drahomíra FaktorováBiology Center, Institute of Parasitology, Czech Academy of Sciences, České Budějovice (Budweis), 370 05, Czech Republic Faculty of Sciences, University of South Bohemia, České Budějovice (Budweis), 370 05, Czech Republic.
Adéla KřížováFaculty of Sciences, University of South Bohemia, České Budějovice (Budweis), 370 05, Czech Republic.
Lucie KafkováDepartment of Microbiology and Immunology, School of Medicine, State University of New York at Buffalo, Buffalo, New York 14214, USA.
Laurie K ReadDepartment of Microbiology and Immunology, School of Medicine, State University of New York at Buffalo, Buffalo, New York 14214, USA.
Julius LukešBiology Center, Institute of Parasitology, Czech Academy of Sciences, České Budějovice (Budweis), 370 05, Czech Republic Faculty of Sciences, University of South Bohemia, České Budějovice (Budweis), 370 05, Czech Republic Canadian Institute for Advanced Research, Toronto, Ontario M5G 1Z8, Canada.
Hassan HashimiBiology Center, Institute of Parasitology, Czech Academy of Sciences, České Budějovice (Budweis), 370 05, Czech Republic Faculty of Sciences, University of South Bohemia, České Budějovice (Budweis), 370 05, Czech Republic.
Sewanee: The University of the South · USUniversity at Buffalo, State University of New York · USCanadian Institute for Advanced Research · CA

Funding

Regulation of RNA editing in Trypansoma bruceiR01AI061580 · NIAID · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI READ, LAURIE K. · 2006 to 2015
$3.0M
NIAID NIH HHS R01 AI061580
6 · The paper itself

Abstract

Trypanosoma brucei is the causative agent of the human and veterinarian diseases African sleeping sickness and nagana. A majority of its mitochondrial-encoded transcripts undergo RNA editing, an essential process of post-transcriptional uridine insertion and deletion to produce translatable mRNA. Besides the well-characterized RNA editing core complex, the mitochondrial RNA-binding 1 (MRB1) complex is one of the key players. It comprises a core complex of about six proteins, guide RNA-associated proteins (GAPs) 1/2, which form a heterotetramer that binds and stabilizes gRNAs, plus MRB5390, MRB3010, and MRB11870, which play roles in initial stages of RNA editing, presumably guided by the first gRNA:mRNA duplex in the case of the latter two proteins. To better understand all functions of the MRB1 complex, we performed a functional analysis of the MRB8620 core subunit, the only one not characterized so far. Here we show that MRB8620 plays a role in RNA editing in both procyclic and bloodstream stages of T. brucei, which reside in the tsetse fly vector and mammalian circulatory system, respectively. While RNAi silencing of MRB8620 does not affect procyclic T. brucei fitness when grown in glucose-containing media, it is somewhat compromised in cells grown in the absence of this carbon source. MRB8620 is crucial for integrity of the MRB1 core, such as its association with GAP1/2, which presumably acts to deliver gRNAs to this complex. In contrast, GAP1/2 is not required for the fabrication of the MRB1 core. Disruption of the MRB1 core assembly is followed by the accumulation of mRNAs associated with GAP1/2.

Indexed as

RNA EditingCell LineMitochondriaMitochondrial ProteinsProtozoan ProteinsRNA, MessengerTrypanosoma brucei bruceiMitochondrial ProteinsProtozoan ProteinsRNA, MessengermitochondrionRNA editingtrypanosome

Identifiers

PMID26447184
PMCPMC4647463
OpenAlexW2260623803

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.