Evidence map›Paper›PMID 26445909›Full record

ArticleScientific reports2015

Highly Efficient CYP167A1 (EpoK) dependent Epothilone B Formation and Production of 7-Ketone Epothilone D as a New Epothilone Derivative.

Fredy Kern, Tobias K F Dier, Yogan Khatri, Kerstin M Ewen, Jean-Pierre Jacquot, Dietrich A Volmer, Rita Bernhardt

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
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  4. Heterologous Expression of the Hot Pepper ABA 8'-Hydroxylase inJournal of microbiology and biotechnology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Fredy KernDepartment of Biochemistry, Saarland University, 66123 Saarbrücken, Germany.
Tobias K F DierInstitute of Bioanalytical Chemistry, Saarland University, 66123 Saarbrücken, Germany.
Yogan KhatriDepartment of Biochemistry, Saarland University, 66123 Saarbrücken, Germany.
Kerstin M EwenDepartment of Biochemistry, Saarland University, 66123 Saarbrücken, Germany.
Jean-Pierre JacquotUnité Mixte de Recherches, 1136 Interaction arbres microorganismes INRA, Nancy University, 54506 Vandoeuvre-lès-Nancy cedex, France.
Dietrich A VolmerInstitute of Bioanalytical Chemistry, Saarland University, 66123 Saarbrücken, Germany.
Rita BernhardtDepartment of Biochemistry, Saarland University, 66123 Saarbrücken, Germany.
Saarland University · DEInteractions Arbres-Microorganismes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Since their discovery in the soil bacterium Sorangium cellulosum, epothilones have emerged as a valuable substance class with promising anti-tumor activity. Because of their benefits in the treatment of cancer and neurodegenerative diseases, epothilones are targets for drug design and pharmaceutical research. The final step of their biosynthesis - a cytochrome P450 mediated epoxidation of epothilone C/D to A/B by CYP167A1 (EpoK) - needs significant improvement, in particular regarding the efficiency of its redox partners. Therefore, we have investigated the ability of various hetero- and homologous redox partners to transfer electrons to EpoK. Hereby, a new hybrid system was established with conversion rates eleven times higher and Vmax of more than seven orders of magnitudes higher as compared with the previously described spinach redox chain. This hybrid system is the most efficient redox chain for EpoK described to date. Furthermore, P450s from So ce56 were identified which are able to convert epothilone D to 14-OH, 21-OH, 26-OH epothilone D and 7-ketone epothilone D. The latter one represents a novel epothilone derivative and is a suitable candidate for pharmacological tests. The results revealed myxobacterial P450s from S. cellulosum So ce56 as promising candidates for protein engineering for biotechnological production of epothilone derivatives.

Indexed as

ElectronsAntineoplastic AgentsBacterial ProteinsBiocatalysisCloning, MolecularCytochrome P-450 Enzyme SystemElectron TransportEpothilonesEscherichia coliFerredoxinsGene ExpressionKetonesMyxococcalesOxidation-ReductionPhylogenyProtein EngineeringAntineoplastic AgentsBacterial ProteinsCytochrome P-450 Enzyme SystemEpothilonesFerredoxinsKetonesRecombinant Proteins

Identifiers

PMID26445909
PMCPMC4597204
OpenAlexW2425989220

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.