Evidence map›Paper›PMID 26445627›Full record

ArticleStandards in genomic sciences2015

Complete genome sequence of the chromate-reducing bacterium Thermoanaerobacter thermohydrosulfuricus strain BSB-33.

Pamela Bhattacharya, Adam Barnebey, Marcin Zemla, Lynne Goodwin, Manfred Auer, Steven M Yannone

Abstract read
In one paragraph

Article in Standards in genomic sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Draft genome ofMicrobiology resource announcements · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Pamela BhattacharyaLife Sciences Division, Lawrence Berkeley National Laboratory, Building 84, Mail Stop 84-171, 1 Cyclotron Road, Berkeley, CA 94720 USA.
Adam BarnebeyLife Sciences Division, Lawrence Berkeley National Laboratory, Building 84, Mail Stop 84-171, 1 Cyclotron Road, Berkeley, CA 94720 USA.
Marcin ZemlaLife Sciences Division, Lawrence Berkeley National Laboratory, Building 84, Mail Stop 84-171, 1 Cyclotron Road, Berkeley, CA 94720 USA.
Lynne GoodwinBioscience Division, Los Alamos National Laboratory, Los Alamos, NM USA.
Manfred AuerLife Sciences Division, Lawrence Berkeley National Laboratory, Building 84, Mail Stop 84-171, 1 Cyclotron Road, Berkeley, CA 94720 USA.
Steven M YannoneLife Sciences Division, Lawrence Berkeley National Laboratory, Building 84, Mail Stop 84-171, 1 Cyclotron Road, Berkeley, CA 94720 USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thermoanaerobacter thermohydrosulfuricus BSB-33 is a thermophilic gram positive obligate anaerobe isolated from a hot spring in West Bengal, India. Unlike other T. thermohydrosulfuricus strains, BSB-33 is able to anaerobically reduce Fe(III) and Cr(VI) optimally at 60 °C. BSB-33 is the first Cr(VI) reducing T. thermohydrosulfuricus genome sequenced and of particular interest for bioremediation of environmental chromium contaminations. Here we discuss features of T. thermohydrosulfuricus BSB-33 and the unique genetic elements that may account for the peculiar metal reducing properties of this organism. The T. thermohydrosulfuricus BSB-33 genome comprises 2597606 bp encoding 2581 protein genes, 12 rRNA, 193 pseudogenes and has a G + C content of 34.20 %. Putative chromate reductases were identified by comparative analyses with other Thermoanaerobacter and chromate-reducing bacteria.

Indexed as

AnaerobicBioremediationChromateChromiumGram-positiveMetalReducingThermoanaerobacterThermophilic

Identifiers

PMID26445627
PMCPMC4595116

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.