Evidence map›Paper›PMID 26445432›Full record

ReviewBiophysical journal2015

H-NS Regulates Gene Expression and Compacts the Nucleoid: Insights from Single-Molecule Experiments.

Ricksen S Winardhi, Jie Yan, Linda J Kenney

Open access · bronzeAbstract readReview
In one paragraph

Review in Biophysical journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 101 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Prediction of antimicrobial resistance inMicrobiology spectrum · 2025
    Article
  11. Nucleoid-associated proteins: molecular mechanisms in microbial adaptation.World journal of microbiology & biotechnology · 2025
    Review
  12. Review
  13. Article
  14. Review
  15. Review
  16. One Earth: The Equilibrium between the Human and the Bacterial Worlds.International journal of molecular sciences · 2023
    Review
  17. Article
  18. Article
  19. Serotype conversion geneFrontiers in microbiology · 2023
    Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Ricksen S WinardhiMechanobiology Institute, National University of Singapore, Singapore; Department of Physics, National University of Singapore, Singapore.
Jie YanMechanobiology Institute, National University of Singapore, Singapore; Department of Physics, National University of Singapore, Singapore. Electronic address: phyyj@nus.edu.sg.
Linda J KenneyMechanobiology Institute, National University of Singapore, Singapore; Department of Biological Sciences, National University of Singapore, Singapore; Jesse Brown Veterans Affairs Medical Center, Chicago, Illinois; Department of Microbiology and Immunology, University of Illinois at Chicago, Chicago, Illinois. Electronic address: kenneyl@uic.edu.
National University of Singapore · SG

Funding

OmpR and SsrB Regulation of Salmonella VirulenceI01BX000372 · VA · JESSE BROWN VA MEDICAL CENTER · PI KENNEY, LINDA J. · 2009 to 2017
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BLRD VA I01 BX000372
6 · The paper itself

Abstract

A set of abundant nucleoid-associated proteins (NAPs) play key functions in organizing the bacterial chromosome and regulating gene transcription globally. Histone-like nucleoid structuring protein (H-NS) is representative of a family of NAPs that are widespread across bacterial species. They have drawn extensive attention due to their crucial function in gene silencing in bacterial pathogens. Recent rapid progress in single-molecule manipulation and imaging technologies has made it possible to directly probe DNA binding by H-NS, its impact on DNA conformation and topology, and its competition with other DNA-binding proteins at the single-DNA-molecule level. Here, we review recent findings from such studies, and provide our views on how these findings yield new insights into the understanding of the roles of H-NS family members in DNA organization and gene silencing.

Indexed as

Bacterial ProteinsDNA-Binding ProteinsGene Expression Regulation, BacterialBacterial ProteinsDNA-Binding ProteinsH-NS protein, bacteria

Identifiers

PMID26445432
PMCPMC4601063
OpenAlexW1953757982

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.