Evidence map›Paper›PMID 26444865›Full record

ArticleJournal of hematology & oncology2015

Comprehensive serial molecular profiling of an "N of 1" exceptional non-responder with metastatic prostate cancer progressing to small cell carcinoma on treatment.

Kunal C Kadakia, Scott A Tomlins, Saagar K Sanghvi, Andi K Cani, Kei Omata, Daniel H Hovelson, Chia-Jen Liu, Kathleen A Cooney

Open access · goldAbstract readCase Reports
In one paragraph

Article in Journal of hematology & oncology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

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  7. Tubulocystic renal cell carcinoma: a distinct clinicopathologic entity with a characteristic genomic profile.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2019
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  8. A gastric MANEC with an adenocarcinoma of fundic-gland type as exocrine component.Virchows Archiv : an international journal of pathology · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Kunal C KadakiaDepartment of Internal Medicine, University of Michigan Comprehensive Cancer Center, 7216 Cancer Center, SPC 5948, 1500 East Medical Center Drive, Ann Arbor, MI, 48109, USA. kkadakia@med.umich.edu.
Scott A TomlinsDepartment of Pathology and Urology, Michigan Center for Translational Pathology; University of Michigan Comprehensive Cancer Center, Ann Arbor, MI, 48109, USA. tomlinss@umich.edu.
Saagar K SanghviBoonshoft School of Medicine, Wright State University, Dayton, USA. saagar.sanghvi@wright.edu.
Andi K CaniDepartment of Pathology, Michigan Center for Translational Pathology, Ann Arbor, MI, 48109, USA. andicani@med.umich.edu.
Kei OmataDepartment of Pathology, Michigan Center for Translational Pathology, Ann Arbor, MI, 48109, USA. komata@med.umich.edu.
Daniel H HovelsonDepartment of Pathology, Michigan Center for Translational Pathology, Ann Arbor, MI, 48109, USA. dhovelso@med.umich.edu.
Chia-Jen LiuDepartment of Pathology, Michigan Center for Translational Pathology, Ann Arbor, MI, 48109, USA. liuchiaj@med.umich.edu.
Kathleen A CooneyDepartment of Internal Medicine, University of Michigan Comprehensive Cancer Center, 7216 Cancer Center, SPC 5948, 1500 East Medical Center Drive, Ann Arbor, MI, 48109, USA. kcooney@med.umich.edu.
Michigan Center for Translational Pathology · USUniversity of Michigan–Ann Arbor · USWright State University · US

Funding

Exploiting drivers of androgen receptor signaling negative prostate cancer for prR01CA183857 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TOMLINS, SCOTT A · 2014 to 2018
$1.6M
NCI NIH HHS R01 CA183857
6 · The paper itself

Abstract

importanceSmall cell carcinoma/neuroendocrine prostate cancer (NePC) is a lethal, poorly understood prostate cancer (PCa) subtype. Controversy exists about the origin of NePC in this setting.

objectiveTo molecularly profile archived biopsy specimens from a case of early-onset PCa that rapidly progressed to NePC to identify drivers of the aggressive course and mechanisms of NePC origin and progression. DESIGN, SETTING, AND

participantsA 47-year-old patient presented with metastatic prostatic adenocarcinoma (Gleason score 9). After a 6-month response to androgen deprivation therapy, the patient developed jaundice and liver biopsy revealed exclusively NePC. Targeted next generation sequencing (NGS) from formalin-fixed paraffin-embedded (FFPE)-isolated DNA was performed from the diagnostic prostate biopsy and the liver biopsy at progression.

interventionAndrogen deprivation therapy for adenocarcinoma followed by multiagent chemotherapy for NePC. MAIN OUTCOMES AND MEASURES: Identification of the mutational landscape in primary adenocarcinoma and NePC liver metastasis. Whether the NePC arose independently or was derived from the primary adenocarcinoma was considered based on mutational profiles.

resultsA deleterious somatic SMAD4 L535fs variant was present in both prostate and liver specimens; however, a TP53 R282W mutation was exclusively enriched in the liver specimen. Copy number analysis identified concordant, low-level alterations in both specimens, with focal MYCL amplification and homozygous PTEN, RB1, and MAP2K4 losses identified exclusively in the NePC specimen. Integration with published genomic profiles identified MYCL as a recurrently amplified in NePC. CONCLUSIONS AND RELEVANCE: NGS of routine biopsy samples from an exceptional non-responder identified SMAD4 as a driver of the aggressive course and supports derivation of NePC from primary adenocarcinoma (transdifferentiation).

Indexed as

AdenocarcinomaAndrogen AntagonistsCarcinoma, Small CellCell TransdifferentiationDisease ProgressionGene Expression ProfilingGene Expression Regulation, NeoplasticGenetic Predisposition to DiseaseHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedNeoplasm MetastasisProstatic NeoplasmsSmad4 ProteinTreatment OutcomeAndrogen AntagonistsSmad4 ProteinSMAD4 protein, human

Identifiers

PMID26444865
PMCPMC4596504
OpenAlexW2106400930

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.