Evidence map›Paper›PMID 26443449›Full record

SynthesisNature communications2015

Large-scale association analysis in Asians identifies new susceptibility loci for prostate cancer.

Meilin Wang, Atsushi Takahashi, Fang Liu, Dingwei Ye, Qiang Ding, Chao Qin, Changjun Yin, Zhengdong Zhang, Koichi Matsuda, Michiaki Kubo and 13 more

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 3 pooled it
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 3 syntheses or guidelines pooled it, 60 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Article
  7. Article
  8. piRNA PROPER Suppresses DUSP1 Translation by Targeting NAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Biomarkers of Aggressive Prostate Cancer at Diagnosis.International journal of molecular sciences · 2023
    Review
  15. Article
  16. Review
  17. Article
  18. Leveraging genetic ancestry to study health disparities.American journal of physical anthropology · 2021
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 13 institutions in 4 countries.

Meilin WangState Key Laboratory of Reproductive Medicine, Nanjing Medical University, Nanjing 210029, China.
Atsushi TakahashiLaboratory for Statistical Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama 230-0045, Japan.
Fang LiuFudan Institute of Urology, Huashan Hospital, Fudan University, Shanghai 200040, China.
Dingwei YeDepartment of Urology, Fudan University Shanghai Cancer Center, Shanghai Medical College, Fudan University, Shanghai 200032, China.
Qiang DingFudan Institute of Urology, Huashan Hospital, Fudan University, Shanghai 200040, China.
Chao QinDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210029, China.
Changjun YinDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210029, China.
Zhengdong ZhangDepartment of Molecular and Genetic Toxicology, Key Laboratory of Modern Toxicology of Ministry of Education, School of Public Health, Nanjing Medical University, Nanjing 211166, China.
Koichi MatsudaLaboratory of Molecular Medicine, Human Genome Center, Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.ORCID http://orcid.org/0000-0001-7292-2686
Michiaki KuboLaboratory for Genotyping Development, RIKEN Center for Integrative Medical Sciences, Yokohama 230-0045, Japan.
Rong NaFudan Institute of Urology, Huashan Hospital, Fudan University, Shanghai 200040, China.
Xiaoling LinFudan Institute of Urology, Huashan Hospital, Fudan University, Shanghai 200040, China.
Haowen JiangFudan Institute of Urology, Huashan Hospital, Fudan University, Shanghai 200040, China.
Shancheng RenDepartment of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai 200433, China.
Jielin SunCenter for Cancer Genomics, Wake Forest University School of Medicine, Winston-Salem, North Carolina 27157, USA.
S Lilly ZhengCenter for Cancer Genomics, Wake Forest University School of Medicine, Winston-Salem, North Carolina 27157, USA.
Loic Le MarchandDepartment of Epidemiology Program, University of Hawaii Cancer Center, Honolulu, Hawai 96813, USA.
William B IsaacsDepartment of Urology, James Buchanan Brady Urologic Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland 21287, USA.
Zengnan MoCenter for Genomic and Personalized Medicine, Guangxi Medical University, Nanning, Guangxi 530021, China.
Christopher A HaimanDepartment of Preventive Medicine, Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, California 90089, USA.
Yinghao SunDepartment of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai 200433, China.
Hidewaki NakagawaLaboratory for Genome Sequencing Analysis, RIKEN Center for Integrative Medical Sciences, Tokyo 108-8639, Japan.
Jianfeng XuFudan Institute of Urology, Huashan Hospital, Fudan University, Shanghai 200040, China.
Fudan University · CNRIKEN Center for Integrative Medical Sciences · JPJiangsu Province Hospital · CNMinistry of Education · KRNorthShore University HealthSystem · USSecond Military Medical University · CNFudan University Shanghai Cancer Center · CNGuangxi Medical University · CNJohns Hopkins University · USThe University of Tokyo · JPUniversity of Hawaiʻi at Mānoa · USUniversity of Southern California · USWake Forest University · US

Funding

Understanding Population Differences in Cancer: The MEC StudyU01CA164973 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI HAIMAN, CHRISTOPHER ALAN, LE MARCHAND, LOIC · 2015 to 2025
$37.4M
Understanding Ethnic Differences in Cancer: The Multiethnic Cohort StudyUM1CA164973 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI HENDERSON, BRIAN E, LE MARCHAND, LOIC · 2012 to 2014
$11.3M
A Multiethnic Genome-Wide Scan of Prostate CancerU01HG004726 · NHGRI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HAIMAN, CHRISTOPHER ALAN · 2008 to 2009
$1.2M
NCI NIH HHS CA164973NCI NIH HHS U01 CA164973NCI NIH HHS UM1 CA164973NHGRI NIH HHS HG004726NHGRI NIH HHS U01 HG004726
6 · The paper itself

Abstract

Genome-wide association studies (GWAS) have identified ∼100 genetic loci associated with prostate cancer risk. Less than a dozen of these loci were initially identified from GWAS in two Asian populations, likely because of smaller sample sizes of these individual GWAS in Asians. Here, we conduct a large-scale meta-analysis of two GWAS from the Japanese population (1,583 cases and 3,386 controls) and the Chinese population (1,417 cases and 1,008 controls), followed by replication in three independent sample sets. We identify two independent susceptibility loci for prostate cancer at 11p15.4 (rs12791447, P=3.59 × 10(-8); PPFIBP2) and 14q23.2 (rs58262369, P=6.05 × 10(-10); ESR2). The mRNA levels of PPFIBP2 and ESR2 are differentially expressed in prostate tumours and paired normal tissues. Our study adds two new loci to the limited number of prostate cancer risk-associated variants in Asians and provides important insight into potential biological mechanisms of prostate cancer.

Indexed as

AgedAsian PeopleCarrier ProteinsChinaEstrogen Receptor betaGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansIntracellular Signaling Peptides and ProteinsJapanMaleMembrane ProteinsMiddle AgedProstatic NeoplasmsRNA, MessengerCarrier ProteinsESR2 protein, humanEstrogen Receptor betaIntracellular Signaling Peptides and ProteinsMembrane ProteinsPPFIBP2 protein, humanRNA, Messenger

Identifiers

PMID26443449
PMCPMC4633711
OpenAlexW2261132199

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.