Evidence map›Paper›PMID 26442844›Full record

ReviewAnnual review of genetics2015

General Stress Signaling in the Alphaproteobacteria.

Aretha Fiebig, Julien Herrou, Jonathan Willett, Sean Crosson

Open access · bronzeAbstract readReview
In one paragraph

Review in Annual review of genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
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  8. RpoS and the bacterial general stress response.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. TheAnnual review of microbiology · 2023
    Review
  15. Article
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  17. Article
  18. Article
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Aretha FiebigDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, Illinois 60637; email: scrosson@uchicago.edu.
Julien HerrouDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, Illinois 60637; email: scrosson@uchicago.edu.
Jonathan WillettDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, Illinois 60637; email: scrosson@uchicago.edu.
Sean CrossonDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, Illinois 60637; email: scrosson@uchicago.edu.
University of Chicago · US

Funding

Re-Engineering Translational Research at the University of ChicagoUL1TR000430 · NCATS · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2012 to 2016
$20.2M
Intergrated control of Caulobacter cell physiology by visible light and stressR01GM087353 · NIGMS · UNIVERSITY OF CHICAGO · PI CROSSON, SEAN · 2009 to 2018
$2.8M
Molecular mechanism of general stress signaling in Brucella abortusR01AI107159 · NIAID · UNIVERSITY OF CHICAGO · PI CROSSON, SEAN · 2014 to 2018
$2.2M
NCATS NIH HHS UL1 TR000430NIAID NIH HHS 1R01AI107159NIAID NIH HHS R01 AI107159NIGMS NIH HHS 1R01GM087353NIGMS NIH HHS R01 GM087353
6 · The paper itself

Abstract

The Alphaproteobacteria uniquely integrate features of two-component signal transduction and alternative σ factor regulation to control transcription of genes that ensure growth and survival across a range of stress conditions. Research over the past decade has led to the discovery of the key molecular players of this general stress response (GSR) system, including the sigma factor σ(EcfG), its anti-σ factor NepR, and the anti-anti-σ factor PhyR. The central molecular event of GSR activation entails aspartyl phosphorylation of PhyR, which promotes its binding to NepR and thereby releases σ(EcfG) to associate with RNAP and direct transcription. Recent studies are providing a new understanding of complex, multilayered sensory networks that activate and repress this central protein partner switch. This review synthesizes our structural and functional understanding of the core GSR regulatory proteins and highlights emerging data that are defining the systems that regulate GSR transcription in a variety of species.

Indexed as

AlphaproteobacteriaBacterial ProteinsChromosomes, BacterialGene Expression Regulation, BacterialSignal TransductionStress, PhysiologicalBacterial ProteinsECF sigma factorHWE and HisKA_2 kinasespartner switchPhyRsignal transductiontwo-component signaling

Identifiers

PMID26442844
PMCPMC4710059
OpenAlexW2156906671

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.