Evidence map›Paper›PMID 26442502›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2016

Kupffer's vesicle size threshold for robust left-right patterning of the zebrafish embryo.

Jason J Gokey, Yongchang Ji, Hwee Goon Tay, Bridget Litts, Jeffrey D Amack

Abstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

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  14. Simulations of particle tracking in the oligociliated mouse node and implications for left-right symmetry-breaking mechanics.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jason J GokeyDepartment of Cell and Developmental Biology, State University of New York, Upstate Medical University, Syracuse, New York.
Yongchang JiDepartment of Cell and Developmental Biology, State University of New York, Upstate Medical University, Syracuse, New York.
Hwee Goon TayDepartment of Cell and Developmental Biology, State University of New York, Upstate Medical University, Syracuse, New York.
Bridget LittsDepartment of Cell and Developmental Biology, State University of New York, Upstate Medical University, Syracuse, New York.
Jeffrey D AmackDepartment of Cell and Developmental Biology, State University of New York, Upstate Medical University, Syracuse, New York.

Funding

Pulmonary Development and Disease Pathogenesis Training ProgramT32HL007752 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI Francis Xavier McCormack, Anne-Karina Theresia Perl · 1994 to 2026
$6.3M
Regulation of Ciliated Cells that Control Cardiac LateralityR01HL095690 · NHLBI · UPSTATE MEDICAL UNIVERSITY · PI AMACK, JEFFREY D · 2009 to 2014
$1.7M
NHLBI NIH HHS R01 HL095690NHLBI NIH HHS R01HL095690NHLBI NIH HHS T32 HL007752
6 · The paper itself

Abstract

backgroundMotile cilia in the "organ of asymmetry" create directional fluid flows that are vital for left-right (LR) asymmetric patterning of vertebrate embryos. Organ function often depends on tightly regulated organ size control, but the role of organ of asymmetry size in LR patterning has remained unknown. Observations of the organ of asymmetry in the zebrafish, called Kupffer's vesicle (KV), have suggested significant variations in KV size in wild-type embryos, raising questions about the impact of KV organ size on LR patterning.

resultsTo understand the relationship between organ of asymmetry size and its function, we characterized variations in KV at several developmental stages and in several different zebrafish strains. We found that the number of KV cilia and the size of the KV lumen were highly variable, whereas the length of KV cilia showed less variation. These variabilities were similar among different genetic backgrounds. By specifically modulating KV size and analyzing individual embryos, we identified a size threshold that is necessary for KV function.

conclusionsTogether these results indicate the KV organ of asymmetry size is not tightly controlled during development, but rather must only exceed a threshold to direct robust LR patterning of the zebrafish embryo.

Indexed as

AnimalsBody PatterningCiliaEmbryonic DevelopmentEmbryo, NonmammalianZebrafishciliacongenital diseasedevelopmental noiseleft-right patterningorgan size control

Identifiers

PMID26442502
PMCPMC5434515

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.