Evidence map›Paper›PMID 26442082›Full record

ArticleFrontiers in plant science2015

Genome-wide analysis and expression profiling under heat and drought treatments of HSP70 gene family in soybean (Glycine max L.).

Ling Zhang, Hong-Kun Zhao, Qian-Li Dong, Yuan-Yu Zhang, Yu-Min Wang, Hai-Yun Li, Guo-Jie Xing, Qi-Yun Li, Ying-Shan Dong

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
10.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 130 citations in OpenAlex.

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8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Ling ZhangAgro-Biotechnology Research Institute, Jilin Academy of Agricultural Sciences Changchun, China.
Hong-Kun ZhaoCrop Germplasm Institute, Jilin Academy of Agricultural Sciences Gongzhuling, China.
Qian-Li DongDepartment of Biology, Beijing Normal University Beijing, China.
Yuan-Yu ZhangAgro-Biotechnology Research Institute, Jilin Academy of Agricultural Sciences Changchun, China.
Yu-Min WangAgro-Biotechnology Research Institute, Jilin Academy of Agricultural Sciences Changchun, China.
Hai-Yun LiAgro-Biotechnology Research Institute, Jilin Academy of Agricultural Sciences Changchun, China.
Guo-Jie XingAgro-Biotechnology Research Institute, Jilin Academy of Agricultural Sciences Changchun, China.
Qi-Yun LiInstitute of Plant Protection, Jilin Academy of Agricultural Sciences Gongzhuling, China.
Ying-Shan DongAgro-Biotechnology Research Institute, Jilin Academy of Agricultural Sciences Changchun, China.
Jilin Academy of Agricultural Sciences · CNBeijing Normal University · CNBiotechnology Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heat shock proteins (HSPs) perform a fundamental role in protecting plants against abiotic stresses. Previous studies have made great efforts in the functional analysis of individual family members, but there has not yet been an overall analysis or expression profiling of the HSP70 gene family in soybeans (Glycine max L.). In this study, an investigation of the soybean genome revealed 61 putative HSP70 genes, which were evaluated. These genes were classified into eight sub-families, denoted I-VIII, based on a phylogenetic analysis. In each sub-family, the constituent parts of the gene structure and motif were relatively conserved. These GmHSP70 genes were distributed unequally on 17 of the 20 chromosomes. The analysis of the expression profiles showed that 53 of the 61 GmHSP70 genes were differentially expressed across the 14 tissues. However, most of the GmHSP70s were differentially expressed in a tissue-specific expression pattern. Furthermore, the expression of some of the duplicate genes was partially redundant, while others showed functional diversity. The quantitative real-time PCR (qRT-PCR) analysis of the 61 soybean HSP70 genes confirmed their stress-inducible expression patterns under both drought and heat stress. These findings provide a thorough overview of the evolution and modification of the GmHSP70 gene family, which will help to determine the functional characteristics of the HSP70 genes in soybean growth and development.

Indexed as

expression patterngene structuregenome-wide analysisHSP70 gene familyphylogenysoybean (Glycine max L.)

Identifiers

PMID26442082
PMCPMC4585176
OpenAlexW1864836263

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.