Evidence map›Paper›PMID 26442054›Full record

ArticleFrontiers in plant science2015

Differential expression of seven conserved microRNAs in response to abiotic stress and their regulatory network in Helianthus annuus.

Reyhaneh Ebrahimi Khaksefidi, Shirin Mirlohi, Fahimeh Khalaji, Zahra Fakhari, Behrouz Shiran, Hossein Fallahi, Fariba Rafiei, Hikmet Budak, Esmaeil Ebrahimie

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. MicroRNA398: A Master Regulator of Plant Development and Stress Responses.International journal of molecular sciences · 2022
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. MicroRNA-Mediated Responses to Cadmium Stress inPlants (Basel, Switzerland) · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Osa-miR398b boosts HThe New phytologist · 2019
    Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Reyhaneh Ebrahimi KhaksefidiDepartment of Plant Breeding and Biotechnology, Faculty of Agriculture, Shahrekord University Shahrekord, Iran.
Shirin MirlohiDepartment of Plant Breeding and Biotechnology, Faculty of Agriculture, Shahrekord University Shahrekord, Iran.
Fahimeh KhalajiDepartment of Plant Breeding and Biotechnology, Faculty of Agriculture, Shahrekord University Shahrekord, Iran.
Zahra FakhariDepartment of Plant Breeding and Biotechnology, Faculty of Agriculture, Shahrekord University Shahrekord, Iran.
Behrouz ShiranDepartment of Plant Breeding and Biotechnology, Faculty of Agriculture, Shahrekord University Shahrekord, Iran ; Department of Agricultural Biotechnology, Institute of Biotechnology, Shahrekord University Shahrekord, Iran.
Hossein FallahiDepartment of Biology, School of Sciences, Razi University Kermanshah, Iran.
Fariba RafieiDepartment of Plant Breeding and Biotechnology, Faculty of Agriculture, Shahrekord University Shahrekord, Iran.
Hikmet BudakBiological Sciences and Bioengineering Program, Faculty of Engineering and Natural Sciences, Sabanci University Istanbul, Turkey.
Esmaeil EbrahimieFaculty of Agriculture, Institute of Biotechnology, Shiraz University Shiraz, Iran ; Department of Genetics and Evolution, School of Biological Sciences, University of Adelaide Adelaide, SA, Australia ; School of Biological Sciences, Faculty of Science and Engineering, Flinders University Adelaide, Australia.
Shahrekord University · IRRazi University · IRSabancı Üniversitesi · TRShiraz University · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biotic and abiotic stresses affect plant development and production through alternation of the gene expression pattern. Gene expression itself is under the control of different regulators such as miRNAs and transcription factors (TFs). MiRNAs are known to play important roles in regulation of stress responses via interacting with their target mRNAs. Here, for the first time, seven conserved miRNAs, associated with drought, heat, salt and cadmium stresses were characterized in sunflower. The expression profiles of miRNAs and their targets were comparatively analyzed between leaves and roots of plants grown under the mentioned stress conditions. Gene ontology analysis of target genes revealed that they are involved in several important pathways such as auxin and ethylene signaling, RNA mediated silencing and DNA methylation processes. Gene regulatory network highlighted the existence of cross-talks between these stress-responsive miRNAs and the other stress responsive genes in sunflower. Based on network analysis, we suggest that some of these miRNAs in sunflower such as miR172 and miR403 may play critical roles in epigenetic responses to stress. It seems that depending on the stress type, theses miRNAs target several pathways and cellular processes to help sunflower to cope with drought, heat, salt and cadmium stress conditions in a tissue-associated manner.

Indexed as

abiotic stressmiRNAregulatory networksunflower (Helianthus annuus)

Identifiers

PMID26442054
PMCPMC4585256
OpenAlexW2187885078

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.